RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 NBNO60934 754 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 F2P00734 622 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 MMP3P08254 477 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 RPS6P62753 249 aaKnown RBP8.6□□□□□ -1.03
CIITA-214ENST00000636238 DEFB103AP81534 67 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 LAMC2Q13753 1193 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 SMAD2Q15796 467 aaKnown RBP8.6□□□□□ -1.03
CIITA-214ENST00000636238 CCDC96Q2M329 555 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 TRIM71Q2Q1W2 868 aaKnown RBP8.6□□□□□ -1.03
CIITA-214ENST00000636238 TMEM63BQ5T3F8 832 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 GDF6Q6KF10 455 aaPredicted RBP8.6□□□□□ -1.03
CIITA-214ENST00000636238 KCNV1Q6PIU1 500 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 NSUN6Q8TEA1 469 aaKnown RBP8.6□□□□□ -1.03
CIITA-214ENST00000636238 DHX38Q92620 1227 aaKnown RBP8.6□□□□□ -1.03
CIITA-214ENST00000636238 KAT2BQ92831 832 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 TTC14Q96N46 770 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 SNX14Q9Y5W7 946 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 MYH8P13535 1937 aa8.6□□□□□ -1.03
CIITA-214ENST00000636238 C5orf67F2Z3F1 127 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 HAS3O00219 553 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 SLC27A2O14975 620 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 PPFIA4O75335 1185 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 CD2BP2O95400 341 aaKnown RBP8.59□□□□□ -1.03
CIITA-214ENST00000636238 SNHG28P0DPA3 235 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 CPA1P15085 419 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 PTGS1P23219 599 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 CALML3P27482 149 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 ARHGAP1Q07960 439 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 BECN1Q14457 450 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 NECTIN1Q15223 517 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 RABEP1Q15276 862 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 STXBP2Q15833 593 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 CTC1Q2NKJ3 1217 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 EPC2Q52LR7 807 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 GPATCH4Q5T3I0 446 aaKnown RBP8.59□□□□□ -1.03
CIITA-214ENST00000636238 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 SLC30A10Q6XR72 485 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 PPP4R3CPQ6ZMV5 832 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 FBXO11Q86XK2 927 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 MCF2L2Q86YR7 1114 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 SAMD3Q8N6K7 520 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 SPRYD3Q8NCJ5 442 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 PPTC7Q8NI37 304 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 AFG1LQ8WV93 481 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 APBB2Q92870 758 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 C11orf84Q9BUA3 381 aaPredicted RBP8.59□□□□□ -1.03
CIITA-214ENST00000636238 IL17RBQ9NRM6 502 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 DAXXQ9UER7 740 aaPredicted RBP8.59□□□□□ -1.03
CIITA-214ENST00000636238 TAF6LQ9Y6J9 622 aa8.59□□□□□ -1.03
CIITA-214ENST00000636238 FSD2A1L4K1 749 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 RSPH10B2B2RC85 870 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 FOXP2O15409 715 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 EPB41L2O43491 1005 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 EIF3JO75822 258 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 RSPH10BP0C881 870 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 HSPD1P10809 573 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 PSEN2P49810 448 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 NEK4P51957 841 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 ANAPC15P60006 121 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 SMAD4Q13485 552 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 GPM6BQ13491 265 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 MFSD10Q14728 455 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 ALX1Q15699 326 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 ADCK5Q3MIX3 580 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 PLEKHG4Q58EX7 1191 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 CCDC178Q5BJE1 867 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 HFE2Q6ZVN8 426 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 SPRED2Q7Z698 418 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 SERINC5Q86VE9 423 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 HSCBQ8IWL3 235 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 TMEM192Q8IY95 271 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 SEPT8Q92599 483 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 EDAQ92838 391 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 TOP1MTQ969P6 601 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 PPP2R3CQ969Q6 453 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 PURBQ96QR8 312 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 C17orf80Q9BSJ5 609 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 MAP3K20Q9NYL2 800 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 MTUS1Q9ULD2 1270 aa8.58□□□□□ -1.04
CIITA-214ENST00000636238 DDX49Q9Y6V7 483 aaKnown RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 U3KPZ7 1027 aaPredicted RBP8.58□□□□□ -1.04
CIITA-214ENST00000636238 TANC1Q9C0D5 1861 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 ABCB11O95342 1321 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 ZMYM6O95789 1325 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 H3BQ06 376 aaPredicted RBP8.57□□□□□ -1.04
CIITA-214ENST00000636238 RANBP6O60518 1105 aaKnown RBP8.57□□□□□ -1.04
CIITA-214ENST00000636238 ARIH2O95376 493 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 TGFB3P10600 412 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 PDHBP11177 359 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 HOXC8P31273 242 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 GHRHRQ02643 423 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 ZNF543Q08ER8 600 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 COL9A3Q14050 684 aaPredicted RBP8.57□□□□□ -1.04
CIITA-214ENST00000636238 KIAA0753Q2KHM9 967 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 NAALADL2Q58DX5 795 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 TCEAL5Q5H9L2 206 aa8.57□□□□□ -1.04
CIITA-214ENST00000636238 ZNF618Q5T7W0 954 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms