RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 SLC8A2Q9UPR5 921 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 SATB2Q9UPW6 733 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 MAPK8IP1Q9UQF2 711 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 PLEKHG3A1L390 1219 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 TRIM37O94972 964 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 TTC38Q5R3I4 469 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 CYFIP2Q96F07 1278 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 SEC16BQ96JE7 1060 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 SUGCTQ9HAC7 445 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 A1CFQ9NQ94 594 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 BCAP29Q9UHQ4 241 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 KDRP35968 1356 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 RNMTO43148 476 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 SKAP2O75563 359 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ABCD1P33897 745 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 MYLK4Q86YV6 388 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 RDH13Q8NBN7 331 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 GPATCH8Q9UKJ3 1502 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 TMEM232C9JQI7 657 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 TAF5LO75529 589 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 FBLN1P23142 703 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 CCNA1P78396 465 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ZNF653Q96CK0 615 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ZBED2Q9BTP6 218 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ABCF3Q9NUQ8 709 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 NFU1Q9UMS0 254 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 L1RE1Q9UN81 338 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 NUB1Q9Y5A7 615 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 KRIT1O00522 736 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ATP6V1G2O95670 118 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 MMEP08473 750 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 Q3C1V9 767 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 TTC30BQ8N4P2 665 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 MSL3Q8N5Y2 521 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 STAMBPL1Q96FJ0 436 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 TMEM87BQ96K49 555 aa10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 EIF4G3O43432 1585 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-228ENST00000635853 ARHGAP31Q2M1Z3 1444 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 YEATS2Q9ULM3 1422 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 PRDM1O75626 825 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 MTHFSDQ2M296 383 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 ANKRD20A3Q5VUR7 823 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 KDM7AQ6ZMT4 941 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 CABP7Q86V35 215 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 LRRC43Q8N309 656 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 MAN1B1Q9UKM7 699 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 ATXN2Q99700 1313 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 hCG_2014768A0A024R1R8 64 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 ANP32DO95626 131 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 ADCK5Q3MIX3 580 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 XKR9Q5GH70 373 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 WDR93Q6P2C0 686 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 CCNI2Q6ZMN8 369 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 MCF2L2Q86YR7 1114 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 PNKPQ96T60 521 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 LRRIQ3A6PVS8 624 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 SLC4A1P02730 911 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 CYP2J2P51589 502 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 TFDP1Q14186 410 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 LRIG3Q6UXM1 1119 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 REXO1L1PQ8IX06 675 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 NRBP2Q9NSY0 501 aa10.65□□□□□ -0.7
SPTAN1-228ENST00000635853 EIF4E1BA6NMX2 242 aaKnown RBP10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 MAP2K7O14733 419 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 POLR2MP0CAP2 368 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 IL9RQ01113 521 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 KCTD2Q14681 263 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 GPIHBP1Q8IV16 184 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 CEP70Q8NHQ1 597 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 MORC4Q8TE76 937 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 XAGE2Q96GT9 111 aa10.65□□□□□ -0.71
SPTAN1-228ENST00000635853 PHBP35232 272 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 ECE1P42892 770 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 SFMBT2Q5VUG0 894 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 LINC00301Q8NCQ3 95 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 LRRC8CQ8TDW0 803 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 SDCCAG3Q96C92 435 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 AKT3Q9Y243 479 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 TMEM191BP0C7N4 346 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 LMNB1P20700 586 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 GARSP41250 739 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 POLGP54098 1239 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 GTF2IP78347 998 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 IWS1Q96ST2 819 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 ZNF711Q9Y462 761 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 K7ENM7 598 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 KCNK3O14649 394 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 IFNAR2P48551 515 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 SKIV2LQ15477 1246 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 RINT1Q6NUQ1 792 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 RAB44Q7Z6P3 723 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 MRPL11Q9Y3B7 192 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 A6NJR5 290 aa10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 HDLBPQ00341 1268 aaKnown RBP10.64□□□□□ -0.71
SPTAN1-228ENST00000635853 DCLK2Q8N568 766 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms