RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZYXQ15942 572 aaKnown RBP3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 CR1LQ2VPA4 569 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 ANKRD39Q53RE8 183 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 NOL9Q5SY16 702 aaKnown RBP3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 MBLAC2Q68D91 279 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 ETV3LQ6ZN32 361 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 TMC4Q7Z404 712 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 TTLL6Q8N841 843 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 PLEKHO2Q8TD55 490 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 ZNF296Q8WUU4 475 aaPredicted RBP3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 DPF3Q92784 378 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 C8orf37Q96NL8 207 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 ADAMTS1Q9UHI8 967 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 NUDT5Q9UKK9 219 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 WASF3Q9UPY6 502 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 TCAF1Q9Y4C2 921 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 CARMIL1Q5VZK9 1371 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 ROBO2Q9HCK4 1378 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 UACAQ9BZF9 1416 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 PRXQ9BXM0 1461 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 WDR7Q9Y4E6 1490 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 RAPGEF2Q9Y4G8 1499 aa3.86□□□□□ -1.79
SMARCB1-208ENST00000634926 MAGI3Q5TCQ9 1506 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 HECW2Q9P2P5 1572 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 ABCA9Q8IUA7 1624 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 LOC105371045A0A1W2PR82 267 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 STXBP3O00186 592 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 SCAMP3O14828 347 aaKnown RBP3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 AURKAO14965 403 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 CBFA2T2O43439 604 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 FOXS1O43638 330 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 B4GALT4O60513 344 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 VAMP4O75379 141 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 IL13P35225 146 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 XPCQ01831 940 aaPredicted RBP3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 PPP2R5DQ14738 602 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 LDLRAD1Q5T700 205 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 RCSD1Q6JBY9 416 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 RNF207Q6ZRF8 634 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 CABP7Q86V35 215 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 KBTBD2Q8IY47 623 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 USP33Q8TEY7 942 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 ZCCHC14Q8WYQ9 949 aaKnown RBP3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 ZSWIM3Q96MP5 696 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 GNRHR2Q96P88 292 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 PTPRGP23470 1445 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 TEX14Q8IWB6 1497 aa3.85□□□□□ -1.79
SMARCB1-208ENST00000634926 C7orf72A4D263 438 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 SORBS3O60504 671 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 ZNF202O95125 648 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 FUCA1P04066 466 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 ZC3H6P61129 1189 aaKnown RBP3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 DPTQ07507 201 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 REXO1Q8N1G1 1221 aaKnown RBP3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 TRIM8Q9BZR9 551 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 MRS2Q9HD23 443 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 USP35Q9P2H5 1018 aa3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 SUPT16HQ9Y5B9 1047 aaKnown RBP3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 WDR33Q9C0J8 1336 aaKnown RBP3.84□□□□□ -1.79
SMARCB1-208ENST00000634926 KIF21BO75037 1637 aa3.84□□□□□ -1.8
SMARCB1-208ENST00000634926 ADAMTSL3P82987 1691 aa3.84□□□□□ -1.8
SMARCB1-208ENST00000634926 CYP1A1P04798 512 aaPredicted RBP3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 MCM4P33991 863 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 IL12RB1P42701 662 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 PWP1Q13610 501 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 DPY19L1Q2PZI1 675 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 PRAMEF18Q5VWM3 479 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 EEF1DP3Q658K8 133 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 SLFN13Q68D06 897 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 ARHGEF18Q6ZSZ5 1173 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 PLEKHH3Q7Z736 793 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 ADCY4Q8NFM4 1077 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 EXTL1Q92935 676 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 JADE2Q9NQC1 790 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 METTL5Q9NRN9 209 aaKnown RBP3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 ZFR2Q9UPR6 939 aaKnown RBP3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 ARAP3Q8WWN8 1544 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 SIGLEC1Q9BZZ2 1709 aa3.83□□□□□ -1.8
SMARCB1-208ENST00000634926 RICTORQ6R327 1708 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 ARHGEF40Q8TER5 1519 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 HDLBPQ00341 1268 aaKnown RBP3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 ABHD18Q0P651 414 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 NRN1LQ496H8 165 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 INTS3Q68E01 1043 aaKnown RBP3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 TCTN3Q6NUS6 607 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 PCSK4Q6UW60 755 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 RUFY4Q6ZNE9 571 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 TMEM87AQ8NBN3 555 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 NAF1Q96HR8 494 aaKnown RBP3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 DHRS1Q96LJ7 313 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 TMEM168Q9H0V1 697 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 VTI1BQ9UEU0 232 aa3.82□□□□□ -1.8
SMARCB1-208ENST00000634926 ZMYM4Q5VZL5 1548 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 GOLGA3Q08378 1498 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 CNOT4O95628 575 aaKnown RBP3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 ERCC5P28715 1186 aaPredicted RBP3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 FANCCQ00597 558 aa3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 LRRFIP1Q32MZ4 808 aaKnown RBP3.81□□□□□ -1.8
SMARCB1-208ENST00000634926 USP39Q53GS9 565 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms