RNA–Protein interactions for RNA: ENST00000630866.1

SPTAN1-223, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5 BASIC

Gene SPTAN1, Length 7,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-223	ENST00000630866	USP17L24	Q0WX57	530 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	EZH2	Q15910	746 aa	Known RBP	9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MAP7D3	Q8IWC1	876 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SYMPK	Q92797	1274 aa	Known RBP	9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CUEDC2	Q9H467	287 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SPATA31A1	Q5TZJ5	1347 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KCNJ18	B7U540	433 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	HEXIM1	O94992	359 aa	Known RBP	9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PSMC2	P35998	433 aa	Known RBP	9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	JAK3	P52333	1124 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	KCNJ12	Q14500	433 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	NEDD9	Q14511	834 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SYT10	Q6XYQ8	523 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TTC30B	Q8N4P2	665 aa		9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FOXP1	Q9H334	677 aa	Predicted RBP	9.38	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FAM196B	A6NMK8	535 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MED7	O43513	233 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CYP2E1	P05181	493 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CIITA	P33076	1130 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	NOLC1	Q14978	699 aa	Known RBP eCLIP	9.37	□□□□□ -0.91	3e-7	■□□□□ 9.2
SPTAN1-223	ENST00000630866	SEPT2	Q15019	361 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SIX6OS1	Q8N1H7	587 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PFKFB1	P16118	471 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FAM81B	Q96LP2	452 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PARK7	Q99497	189 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	HERC5	Q9UII4	1024 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CPSF1	Q10570	1443 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RPAP1	Q9BWH6	1393 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CIB2	O75838	187 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CELF2	O95319	508 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TBC1D8	O95759	1140 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RNF219	Q5W0B1	726 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	IFNLR1	Q8IU57	520 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	IFIH1	Q9BYX4	1025 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PIH1D3	Q9NQM4	214 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TOPORS	Q9NS56	1045 aa	Predicted RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	BFSP1	Q12934	665 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	EXOC3L4	Q17RC7	722 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ARFGAP2	Q8N6H7	521 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MROH7-TTC4	A0A0A0MT08	1334 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SEC24B	O95487	1268 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	VIM	P08670	466 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	GOLGA8F	Q08AF8	430 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	GOLGA8DP	Q0D2H9	430 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CPLX4	Q7Z7G2	160 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MICALL1	Q8N3F8	863 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CRAMP1	Q96RY5	1269 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PARVG	Q9HBI0	331 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ZSWIM5	Q9P217	1185 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ASB14	A6NK59	587 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	WDR64	B1ANS9	1081 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TUBB	P07437	444 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	NFKBIA	P25963	317 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RSPH14	Q9UHP6	348 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TSKS	Q9UJT2	592 aa		9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.37	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PHKA2	P46019	1235 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PALM2	Q8IXS6	379 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	TTC1	Q99614	292 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PCIF1	Q9H4Z3	704 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ACAD9	Q9H845	621 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SPATA31E1	Q6ZUB1	1445 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FDX1	P10109	184 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CPD	O75976	1380 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	STAT3	P40763	770 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PRPF38A	Q8NAV1	312 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RBM46	Q8TBY0	533 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PRIMPOL	Q96LW4	560 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	UTY	O14607	1347 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ADGRB3	O60242	1522 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	NR2F2	P24468	414 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	POLR2F	P61218	127 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MAP7	Q14244	749 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	HS1BP3	Q53T59	392 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SLFN12L	Q6IEE8	588 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DPF3	Q92784	378 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	OSBP2	Q969R2	916 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RPAP3	Q9H6T3	665 aa	Predicted RBP	9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	9.36	□□□□□ -0.91	4e-6	■■■□□ 17.1
SPTAN1-223	ENST00000630866	SUGT1	Q9Y2Z0	365 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	BNIP3L	O60238	219 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	LMNB1	P20700	586 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MCAM	P43121	646 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	DNAJC21	Q5F1R6	531 aa	Known RBP	9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CTAGE3P	Q8IX95	158 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SPATA33	Q96N06	139 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SAMD15	Q9P1V8	674 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ALK	Q9UM73	1620 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	CDC42BPA	Q5VT25	1732 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SCRN1	Q12765	414 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	LONRF2	Q1L5Z9	754 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	RCSD1	Q6JBY9	416 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	PSMB7	Q99436	277 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	MSTO1	Q9BUK6	570 aa		9.36	□□□□□ -0.91
SPTAN1-223	ENST00000630866	HMGCS2	P54868	508 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	SLC15A2	Q16348	729 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	STRIP1	Q5VSL9	837 aa		9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	ANGEL2	Q5VTE6	544 aa	Known RBP	9.35	□□□□□ -0.91
SPTAN1-223	ENST00000630866	FAM186B	Q8IYM0	893 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms