RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 ADGRF4Q8IZF3 695 aa23.53■■□□□ 1.36
TARDBP-228ENST00000629725 ESR2Q92731 530 aa23.53■■□□□ 1.36
TARDBP-228ENST00000629725 ZKSCAN3Q9BRR0 538 aa23.53■■□□□ 1.36
TARDBP-228ENST00000629725 ZBTB47Q9UFB7 747 aaPredicted RBP23.53■■□□□ 1.36
TARDBP-228ENST00000629725 HTRA4P83105 476 aaPredicted RBP23.52■■□□□ 1.36
TARDBP-228ENST00000629725 DGKHQ86XP1 1220 aa23.52■■□□□ 1.36
TARDBP-228ENST00000629725 DBF4BQ8NFT6 615 aa23.52■■□□□ 1.36
TARDBP-228ENST00000629725 NEK9Q8TD19 979 aa23.52■■□□□ 1.36
TARDBP-228ENST00000629725 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
TARDBP-228ENST00000629725 MRPL11Q9Y3B7 192 aaKnown RBP23.52■■□□□ 1.36
TARDBP-228ENST00000629725 NR3C2P08235 984 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 THPOP40225 353 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 EPC2Q52LR7 807 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 ZNF589Q86UQ0 364 aaPredicted RBP23.51■■□□□ 1.35
TARDBP-228ENST00000629725 TBC1D10CQ8IV04 446 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 PNMA1Q8ND90 353 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 SP7Q8TDD2 431 aaPredicted RBP23.51■■□□□ 1.35
TARDBP-228ENST00000629725 SAMD11Q96NU1 681 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 PXMP2Q9NR77 195 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 NLRC5Q86WI3 1866 aa23.51■■□□□ 1.35
TARDBP-228ENST00000629725 RSPH10B2B2RC85 870 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 H3BQ06 376 aaPredicted RBP23.5■■□□□ 1.35
TARDBP-228ENST00000629725 PPFIA4O75335 1185 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 RSPH10BP0C881 870 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 MKRN4PQ13434 485 aaPredicted RBP23.5■■□□□ 1.35
TARDBP-228ENST00000629725 HIC1Q14526 733 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 QRICH1Q2TAL8 776 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 TIGD5Q53EQ6 642 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 FBXO11Q86XK2 927 aa23.5■■□□□ 1.35
TARDBP-228ENST00000629725 CFBP00751 764 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 HOXD8P13378 290 aaPredicted RBP23.49■■□□□ 1.35
TARDBP-228ENST00000629725 PLEKHG4Q58EX7 1191 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 MYSM1Q5VVJ2 828 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 SERINC5Q86VE9 423 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 IQCA1Q86XH1 822 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 TICAM2Q86XR7 235 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 BANK1Q8NDB2 785 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 KAT14Q9H8E8 782 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 NEDD4P46934 1319 aa23.49■■□□□ 1.35
TARDBP-228ENST00000629725 H3BNC9 293 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 DCXO43602 365 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 DHX16O60231 1041 aaKnown RBP23.48■■□□□ 1.35
TARDBP-228ENST00000629725 NMIQ13287 307 aaPredicted RBP23.48■■□□□ 1.35
TARDBP-228ENST00000629725 HSDL1Q3SXM5 330 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 ASPRV1Q53RT3 343 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 ANKRD45Q5TZF3 282 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 KCNV1Q6PIU1 500 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 SPATA33Q96N06 139 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 YME1L1Q96TA2 773 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 FAM50BQ9Y247 325 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 CCDC171Q6TFL3 1326 aa23.48■■□□□ 1.35
TARDBP-228ENST00000629725 PDE1AP54750 535 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 GPM6BQ13491 265 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 CCDC178Q5BJE1 867 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 CELF3Q5SZQ8 465 aaKnown RBP23.47■■□□□ 1.35
TARDBP-228ENST00000629725 EP400NLQ6ZTU2 488 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 TOP1MTQ969P6 601 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 PABPC5Q96DU9 382 aaKnown RBP23.47■■□□□ 1.35
TARDBP-228ENST00000629725 VAT1LQ9HCJ6 419 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 RALGAPA2Q2PPJ7 1873 aa23.47■■□□□ 1.35
TARDBP-228ENST00000629725 POTEB3A0JP26 581 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 ZNF213O14771 459 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 SORBS3O60504 671 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 MYCLP12524 364 aaPredicted RBP23.46■■□□□ 1.35
TARDBP-228ENST00000629725 NT5C2P49902 561 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 TCEAL5Q5H9L2 206 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 POTEBQ6S5H4 581 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 ATP6V0A1Q93050 837 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 JMJD4Q9H9V9 463 aa23.46■■□□□ 1.35
TARDBP-228ENST00000629725 LAMA4Q16363 1823 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 C17orf102A2RUQ5 167 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 KDM4AO75164 1064 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 RGS20O76081 388 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 UPP2O95045 317 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 GGPS1O95749 300 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 PARP1P09874 1014 aaKnown RBP23.45■■□□□ 1.34
TARDBP-228ENST00000629725 MRE11P49959 708 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 HSD17B4P51659 736 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 TMEM192Q8IY95 271 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 SEPT8Q92599 483 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 PDCD2LQ9BRP1 358 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 C16orf70Q9BSU1 422 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 NSUN3Q9H649 340 aaKnown RBP23.45■■□□□ 1.34
TARDBP-228ENST00000629725 PRKAG3Q9UGI9 489 aa23.45■■□□□ 1.34
TARDBP-228ENST00000629725 MFAP1P55081 439 aaKnown RBP23.44■■□□□ 1.34
TARDBP-228ENST00000629725 ZP2Q05996 745 aa23.44■■□□□ 1.34
TARDBP-228ENST00000629725 ANKS1AQ92625 1134 aa23.44■■□□□ 1.34
TARDBP-228ENST00000629725 AMNQ9BXJ7 453 aa23.44■■□□□ 1.34
TARDBP-228ENST00000629725 KCNH6Q9H252 994 aa23.44■■□□□ 1.34
TARDBP-228ENST00000629725 COL4A6Q14031 1691 aa23.44■■□□□ 1.34
TARDBP-228ENST00000629725 H3BRB1 525 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 OPLAHO14841 1288 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 TGFB3P10600 412 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 SP2Q02086 613 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 NHLH1Q02575 133 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 COL19A1Q14993 1142 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 STOX1Q6ZVD7 989 aa23.43■■□□□ 1.34
TARDBP-228ENST00000629725 ZSCAN10Q96SZ4 725 aaPredicted RBP23.43■■□□□ 1.34
TARDBP-228ENST00000629725 TUT1Q9H6E5 874 aaKnown RBP23.43■■□□□ 1.34
TARDBP-228ENST00000629725 MLXIPQ9HAP2 919 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms