RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 TBC1D9BQ66K14 1250 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 GOLPH3Q9H4A6 298 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 CASZ1Q86V15 1759 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 EDIL3O43854 480 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 SEC24CP53992 1094 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 POLR2FP61218 127 aaKnown RBP20.68■□□□□ 0.9
MECP2-218ENST00000629277 CALCRLQ16602 461 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 COBLL1Q53SF7 1204 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 IFT20Q8IY31 132 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 GUF1Q8N442 669 aaKnown RBP20.68■□□□□ 0.9
MECP2-218ENST00000629277 TBC1D5Q92609 795 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 CDK5RAP3Q96JB5 506 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 RREB1Q92766 1687 aa20.68■□□□□ 0.9
MECP2-218ENST00000629277 KCNQ2O43526 872 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 PPP1R2P41236 205 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 FAM83BQ5T0W9 1011 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 GPR101Q96P66 508 aaPredicted RBP20.67■□□□□ 0.9
MECP2-218ENST00000629277 MTMR9Q96QG7 549 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.67■□□□□ 0.9
MECP2-218ENST00000629277 FAM107BQ9H098 131 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 LAMB1P07942 1786 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 BRD2P25440 801 aaKnown RBP20.67■□□□□ 0.9
MECP2-218ENST00000629277 TNFRSF8P28908 595 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 SOGA3Q5TF21 947 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 KLHL7Q8IXQ5 586 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 REXO1Q8N1G1 1221 aaKnown RBP20.67■□□□□ 0.9
MECP2-218ENST00000629277 RUBCNQ92622 972 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 COA7Q96BR5 231 aa20.67■□□□□ 0.9
MECP2-218ENST00000629277 ZNF335Q9H4Z2 1342 aaPredicted RBP20.66■□□□□ 0.9
MECP2-218ENST00000629277 MYO1FO00160 1098 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 GNA11P29992 359 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 HNRNPH1P31943 449 aaKnown RBP20.66■□□□□ 0.9
MECP2-218ENST00000629277 LSP1P33241 339 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 CACNB1Q02641 598 aaPredicted RBP20.66■□□□□ 0.9
MECP2-218ENST00000629277 SNX29Q8TEQ0 813 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 LSM14BQ9BX40 385 aaKnown RBP20.66■□□□□ 0.9
MECP2-218ENST00000629277 ADAMTS1Q9UHI8 967 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 FRMPD2Q68DX3 1309 aaPredicted RBP20.66■□□□□ 0.9
MECP2-218ENST00000629277 A0A087X0T9 212 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 TRAF5O00463 557 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 FAM228BP0C875 321 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 NELFCDQ8IXH7 590 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 IQCDQ96DY2 449 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 CAPN7Q9Y6W3 813 aa20.66■□□□□ 0.9
MECP2-218ENST00000629277 LRRC63Q05C16 580 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 SLC9C1Q4G0N8 1177 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 SFMBT2Q5VUG0 894 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 RAD54LQ92698 747 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 SPZ1Q9BXG8 430 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 DOT1LQ8TEK3 1739 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 PVALEFA0A1B0GWK0 134 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 SSU72P8A0A1W2PR75 194 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 USP17L5A8MUK1 530 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 RAD51CO43502 376 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 LDHBP07195 334 aaKnown RBP20.65■□□□□ 0.9
MECP2-218ENST00000629277 CCDC40Q4G0X9 1142 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 FAM133AQ8N9E0 248 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 MARCH10Q8NA82 808 aaPredicted RBP20.65■□□□□ 0.9
MECP2-218ENST00000629277 CENPHQ9H3R5 247 aa20.65■□□□□ 0.9
MECP2-218ENST00000629277 SEC63Q9UGP8 760 aaKnown RBP20.65■□□□□ 0.9
MECP2-218ENST00000629277 MYH1P12882 1939 aa20.64■□□□□ 0.9
MECP2-218ENST00000629277 RAPGEF1Q13905 1077 aa20.64■□□□□ 0.9
MECP2-218ENST00000629277 KIAA0753Q2KHM9 967 aa20.64■□□□□ 0.9
MECP2-218ENST00000629277 GLE1Q53GS7 698 aaKnown RBP20.64■□□□□ 0.9
MECP2-218ENST00000629277 RNF10Q8N5U6 811 aaKnown RBP20.64■□□□□ 0.9
MECP2-218ENST00000629277 OR2W6PQ8NHA6 318 aa20.64■□□□□ 0.9
MECP2-218ENST00000629277 EYA3Q99504 573 aa20.64■□□□□ 0.9
MECP2-218ENST00000629277 SSBP05455 408 aaKnown RBP eCLIP20.64■□□□□ 0.89
MECP2-218ENST00000629277 NR1D1P20393 614 aa20.64■□□□□ 0.89
MECP2-218ENST00000629277 HPDP32754 393 aaPredicted RBP20.64■□□□□ 0.89
MECP2-218ENST00000629277 PAK2Q13177 524 aa20.64■□□□□ 0.89
MECP2-218ENST00000629277 NAA35Q5VZE5 725 aa20.64■□□□□ 0.89
MECP2-218ENST00000629277 SUGP1Q8IWZ8 645 aaKnown RBP20.64■□□□□ 0.89
MECP2-218ENST00000629277 RBAK-RBAKDNI3L0D1 243 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 NAB2Q15742 525 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 CEP95Q96GE4 821 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 INPP4AQ96PE3 977 aaPredicted RBP20.63■□□□□ 0.89
MECP2-218ENST00000629277 COL4A3BPQ9Y5P4 624 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 NPHP3-ACAD11A0A0J9YXS1 232 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 FGFR1OPO95684 399 aaKnown RBP20.63■□□□□ 0.89
MECP2-218ENST00000629277 SERPING1P05155 500 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 IRX3P78415 501 aaPredicted RBP20.63■□□□□ 0.89
MECP2-218ENST00000629277 DDB1Q16531 1140 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 MEI1Q5TIA1 1274 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 KDM7AQ6ZMT4 941 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 MAATS1Q7Z4T9 603 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 DDX42Q86XP3 938 aaKnown RBP eCLIP20.63■□□□□ 0.89
MECP2-218ENST00000629277 LINC00116Q8NCU8 138 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 STK17AQ9UEE5 414 aa20.63■□□□□ 0.89
MECP2-218ENST00000629277 GRID2IPA4D2P6 1211 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 CDK8P49336 464 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 COASYQ13057 564 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 CEP85LQ5SZL2 805 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 MYOCDQ8IZQ8 938 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 CEP72Q9P209 647 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 SRP68Q9UHB9 627 aaKnown RBP20.62■□□□□ 0.89
MECP2-218ENST00000629277 PLAAQ9Y263 795 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 ATP6V0A2Q9Y487 856 aa20.62■□□□□ 0.89
MECP2-218ENST00000629277 HDLBPQ00341 1268 aaKnown RBP20.62■□□□□ 0.89
MECP2-218ENST00000629277 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms