RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 UBE2SQ16763 222 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 RTN1Q16799 776 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 CELF3Q5SZQ8 465 aaKnown RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 PCNX4Q63HM2 1172 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 WWC2Q6AWC2 1192 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 FAM109BQ6ICB4 259 aaPredicted RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 PSRC1Q6PGN9 363 aaPredicted RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 KCNV1Q6PIU1 500 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 SYNE3Q6ZMZ3 975 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 SESTD1Q86VW0 696 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 DHX37Q8IY37 1157 aaKnown RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 SCLYQ96I15 445 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 JAKMIP1Q96N16 626 aaKnown RBP12.41□□□□□ -0.42
CHD2-217ENST00000629136 CTAGE1Q96RT6 745 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 IL23AQ9NPF7 189 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 MTMR10Q9NXD2 777 aa12.41□□□□□ -0.42
CHD2-217ENST00000629136 KAT6AQ92794 2004 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 HAS3O00219 553 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 STAM2O75886 525 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 SUPT20HL2P0C7V6 817 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 CASTP20810 708 aaKnown RBP12.4□□□□□ -0.42
CHD2-217ENST00000629136 ICAM3P32942 547 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 APOBRQ0VD83 1088 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 GDF6Q6KF10 455 aaPredicted RBP12.4□□□□□ -0.42
CHD2-217ENST00000629136 BLOC1S2Q6QNY1 142 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 Q6ZUG5 572 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 ZNF365Q70YC5 407 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 CUL5Q93034 780 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 GUCD1Q96NT3 240 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 PSTPIP2Q9H939 334 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 MICAL3Q7RTP6 2002 aa12.4□□□□□ -0.42
CHD2-217ENST00000629136 CHD9Q3L8U1 2897 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 SPATA31C2B4DYI2 1134 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 FIBPO43427 364 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
CHD2-217ENST00000629136 RPS6KB1P23443 525 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 PSEN2P49810 448 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
CHD2-217ENST00000629136 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 GNPTABQ3T906 1256 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 PPP1R18Q6NYC8 613 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 FBXL16Q8N461 479 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 BRF1Q92994 677 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 FAM161BQ96MY7 647 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 SPATA33Q96N06 139 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 TTYH1Q9H313 450 aaPredicted RBP12.39□□□□□ -0.43
CHD2-217ENST00000629136 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 RTEL1Q9NZ71 1219 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 GTF2IRD1Q9UHL9 959 aa12.39□□□□□ -0.43
CHD2-217ENST00000629136 COL4A4P53420 1690 aaPredicted RBP12.38□□□□□ -0.43
CHD2-217ENST00000629136 hCG_1984214I3L0E3 225 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 STXBP3O00186 592 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 ADD1P35611 737 aaKnown RBP12.38□□□□□ -0.43
CHD2-217ENST00000629136 NAPAP54920 295 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 MFSD10Q14728 455 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 PTGISQ16647 500 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 KIAA0753Q2KHM9 967 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 ERICH6BQ5W0A0 696 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 XRRA1Q6P2D8 792 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 ZNF713Q8N859 430 aaPredicted RBP12.38□□□□□ -0.43
CHD2-217ENST00000629136 HERVK_113Q902F9 699 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 DHX38Q92620 1227 aaKnown RBP12.38□□□□□ -0.43
CHD2-217ENST00000629136 C16orf70Q9BSU1 422 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 ALG1Q9BT22 464 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 MLXIPQ9HAP2 919 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 CXXC1Q9P0U4 656 aaPredicted RBP12.38□□□□□ -0.43
CHD2-217ENST00000629136 HDAC6Q9UBN7 1215 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 TELO2Q9Y4R8 837 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 LOXHD1Q8IVV2 1947 aa12.38□□□□□ -0.43
CHD2-217ENST00000629136 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
CHD2-217ENST00000629136 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
CHD2-217ENST00000629136 SPDYE3A6NKU9 549 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 GRXCR1A8MXD5 290 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 PPFIA4O75335 1185 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 LGALS2P05162 132 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 ITGB5P18084 799 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 DNAJB2P25686 324 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 CLK2P49760 499 aaKnown RBP12.37□□□□□ -0.43
CHD2-217ENST00000629136 FGD1P98174 961 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 RBL2Q08999 1139 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 HIC1Q14526 733 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 METTL7BQ6UX53 244 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 OTOP2Q7RTS6 562 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 PGBD1Q96JS3 809 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 RIC8AQ9NPQ8 531 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 NAP1L2Q9ULW6 460 aaPredicted RBP12.37□□□□□ -0.43
CHD2-217ENST00000629136 PCDHA6Q9UN73 950 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 NOD1Q9Y239 953 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 STXBP5LQ9Y2K9 1186 aa12.37□□□□□ -0.43
CHD2-217ENST00000629136 PCDHA8Q9Y5H6 950 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms