RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 ETAA1Q9NY74 926 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 PSD3Q9NYI0 1048 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CLIP2Q9UDT6 1046 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SWAP70Q9UH65 585 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CORINQ9Y5Q5 1042 aa2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 SPAG9O60271 1321 aaKnown RBP2.38□□□□□ -2.03
SPTAN1-216ENST00000629047 CTTNBP2Q8WZ74 1663 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KANK1Q14678 1352 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 HFM1A2PYH4 1435 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 YEATS2Q9ULM3 1422 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 NCOA3Q9Y6Q9 1424 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 FADS2P1A8MWK0 482 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 IPO8O15397 1037 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SGSM2O43147 1006 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 ICMTO60725 284 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 GCFC2P16383 781 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 GBP2P32456 591 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 GCKP35557 465 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 PRPHP41219 470 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KIR2DL1P43626 348 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KIR2DL2P43627 348 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SH3BGRP55822 239 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 GSDMDP57764 484 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 NANOS3P60323 173 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 ICA1Q05084 483 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SNW1Q13573 536 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 GNL2Q13823 731 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 CRYMQ14894 314 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SLMAPQ14BN4 828 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 LRRC14Q15048 493 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 FILIP1LQ4L180 1135 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC38Q502W7 563 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SPDYAQ5MJ70 313 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 OLFML2BQ68BL8 750 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC70Q6NSX1 233 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 ZNF585AQ6P3V2 769 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 USP51Q70EK9 711 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 CCDC186Q7Z3E2 898 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 TMC3Q7Z5M5 1100 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 HOMER1Q86YM7 354 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 MSL3Q8N5Y2 521 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 IQUBQ8NA54 791 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 NUP43Q8NFH3 380 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KIAA1524Q8TCG1 905 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 RNF141Q8WVD5 230 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 TCP11Q8WWU5 503 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 RTF1Q92541 710 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KISS1RQ969F8 398 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 PBXIP1Q96AQ6 731 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KIF1BPQ96EK5 621 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 CHFRQ96EP1 664 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 RSRC1Q96IZ7 334 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 C16orf45Q96MC5 204 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SETDB2Q96T68 719 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SYT3Q9BQG1 590 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 CRACR2AQ9BSW2 395 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 ARFGAP3Q9NP61 516 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 DLL4Q9NR61 685 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 GNL3LQ9NVN8 582 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SPATA6Q9NWH7 488 aaPredicted RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 IMPACTQ9P2X3 320 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 KCNH3Q9ULD8 1083 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 INVSQ9Y283 1065 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 SNCAIPQ9Y6H5 919 aa2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 NKTRP30414 1462 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 VIRMAQ69YN4 1812 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 WDR33Q9C0J8 1336 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 TOP2AP11388 1531 aaKnown RBP2.37□□□□□ -2.03
SPTAN1-216ENST00000629047 USP47Q96K76 1375 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 PLEKHG2Q9H7P9 1386 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SYNJ1O43426 1573 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 MYOM3Q5VTT5 1437 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SCRIBQ14160 1630 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 EIF3CLB5ME19 914 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NPIPB8E9PQR5 432 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 EBAG9O00559 213 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CHUKO15111 745 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 NDUFB5O43674 189 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CDC45O75419 566 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CDKL5O76039 1030 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 LUC7L3O95232 432 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 PFKLP17858 780 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CASTP20810 708 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SLC8A1P32418 973 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 ELF1P32519 619 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 ARHGAP25P42331 645 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CLNS1AP54105 237 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 GSCP56915 257 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CORO7P57737 925 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 INHBEP58166 350 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 ADCY2Q08462 1091 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 MTA1Q13330 715 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TMED1Q13445 227 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 TUBB2AQ13885 445 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 DCTN1Q14203 1278 aa2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SMC1AQ14683 1233 aaKnown RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 CBX2Q14781 532 aaPredicted RBP2.36□□□□□ -2.03
SPTAN1-216ENST00000629047 SART3Q15020 963 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms