RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 OR6J1Q8NGC5 347 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 MAFAQ8NHW3 353 aaPredicted RBP12.76□□□□□ -0.37
DDX41-219ENST00000629036 CUL5Q93034 780 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 AIFM3Q96NN9 605 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
DDX41-219ENST00000629036 PDLIM7Q9NR12 457 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 TMEM260Q9NX78 707 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 TELO2Q9Y4R8 837 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 ELP1O95163 1332 aa12.76□□□□□ -0.37
DDX41-219ENST00000629036 CDH23Q9H251 3354 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 B4DLN1 442 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 SPATA31C2B4DYI2 1134 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 M0R2N6 131 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 MYCNP04198 464 aaPredicted RBP12.75□□□□□ -0.37
DDX41-219ENST00000629036 MMP3P08254 477 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 MYCLP12524 364 aaPredicted RBP12.75□□□□□ -0.37
DDX41-219ENST00000629036 ITGB5P18084 799 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 ITGB8P26012 769 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 ADCY7P51828 1080 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 MRPL12P52815 198 aaKnown RBP12.75□□□□□ -0.37
DDX41-219ENST00000629036 TLE2Q04725 743 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 STK3Q13188 491 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 PTPRSQ13332 1948 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 ZNF697Q5TEC3 545 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 FAM109BQ6ICB4 259 aaPredicted RBP12.75□□□□□ -0.37
DDX41-219ENST00000629036 SH3RF1Q7Z6J0 888 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 SMARCC2Q8TAQ2 1214 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 GTF3C6Q969F1 213 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 PGBD1Q96JS3 809 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 CDX2Q99626 313 aaPredicted RBP12.75□□□□□ -0.37
DDX41-219ENST00000629036 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 STK36Q9NRP7 1315 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 CHD7Q9P2D1 2997 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 PCDHA6Q9UN73 950 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 PCDHA8Q9Y5H6 950 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 UBIAD1Q9Y5Z9 338 aa12.75□□□□□ -0.37
DDX41-219ENST00000629036 GBF1Q92538 1859 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 TRIM43BA6NCK2 446 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 SMCO2A6NFE2 343 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 EIF5BO60841 1220 aaKnown RBP12.74□□□□□ -0.37
DDX41-219ENST00000629036 STAM2O75886 525 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 GH1P01241 217 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 CD4P01730 458 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 FDPSP14324 419 aaKnown RBP12.74□□□□□ -0.37
DDX41-219ENST00000629036 SREBF1P36956 1147 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 NEK4P51957 841 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 FAAP100Q0VG06 881 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 MYSM1Q5VVJ2 828 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 XRRA1Q6P2D8 792 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 NOL8Q76FK4 1167 aaKnown RBP12.74□□□□□ -0.37
DDX41-219ENST00000629036 FAM126BQ8IXS8 530 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 AFG1LQ8WV93 481 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 KAT2BQ92831 832 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 TRIM43Q96BQ3 446 aaPredicted RBP12.74□□□□□ -0.37
DDX41-219ENST00000629036 CTAGE1Q96RT6 745 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 ANO3Q9BYT9 981 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 C22orf23Q9BZE7 217 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 AP5M1Q9H0R1 490 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 STARD7Q9NQZ5 370 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 VPS54Q9P1Q0 977 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 TBX21Q9UL17 535 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 GTF3C3Q9Y5Q9 886 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 MRVI1Q9Y6F6 885 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
DDX41-219ENST00000629036 TRANK1O15050 2925 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 LOXHD1Q8IVV2 1947 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 ARVCFO00192 962 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 TGFB3P10600 412 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 KCNA2P16389 499 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 CPT1AP50416 773 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 PSMC6P62333 389 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 AP3B2Q13367 1082 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 HSDL1Q3SXM5 330 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 CELF3Q5SZQ8 465 aaKnown RBP12.73□□□□□ -0.37
DDX41-219ENST00000629036 NECAB1Q8N987 351 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 NSUN7Q8NE18 718 aaKnown RBP12.73□□□□□ -0.37
DDX41-219ENST00000629036 PPTC7Q8NI37 304 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 CYP2W1Q8TAV3 490 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 RASGRP4Q8TDF6 673 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 MYLIPQ8WY64 445 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 GLT1D1Q96MS3 346 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 SH3GLB2Q9NR46 395 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 ATP11BQ9Y2G3 1177 aa12.73□□□□□ -0.37
DDX41-219ENST00000629036 IGLV3-22A0A075B6J6 115 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
DDX41-219ENST00000629036 HAS3O00219 553 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 KIAA0355O15063 1070 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 FIBPO43427 364 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 ATP9AO75110 1047 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 CABYRO75952 493 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 CD2BP2O95400 341 aaKnown RBP12.72□□□□□ -0.37
DDX41-219ENST00000629036 DEXIO95424 95 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 GGPS1O95749 300 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 F2P00734 622 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 ANKRD1Q15327 319 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 DAGLBQ8NCG7 672 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 GPRASP2Q96D09 838 aa12.72□□□□□ -0.37
DDX41-219ENST00000629036 TBC1D32Q96NH3 1257 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms