RNA–Protein interactions for RNA: ENST00000628343.2

SOX2-OT-246, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 746 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-246ENST00000628343 GGPS1O95749 300 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 CPT1AP50416 773 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 RTP1P59025 263 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 CELF3Q5SZQ8 465 aaKnown RBP15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 C1orf53Q5VUE5 145 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 AFG1LQ8WV93 481 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 CRYGNQ8WXF5 182 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 ZSCAN31Q96LW9 406 aaPredicted RBP15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 GLT1D1Q96MS3 346 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 STARD7Q9NQZ5 370 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 SH2B1Q9NRF2 756 aaPredicted RBP15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 KCNJ14Q9UNX9 436 aa15.52■□□□□ 0.08
SOX2-OT-246ENST00000628343 ELP1O95163 1332 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 M0R2N6 131 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 ZEB2O60315 1214 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 MMP3P08254 477 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 ARHGAP4P98171 946 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 PURAQ00577 322 aaKnown RBP15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 TRIM60Q495X7 471 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 MYSM1Q5VVJ2 828 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 NLRX1Q86UT6 975 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 DAGLBQ8NCG7 672 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 CYP2W1Q8TAV3 490 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 GPRASP2Q96D09 838 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 ALG1Q9BT22 464 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 PHF20Q9BVI0 1012 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 PCDHA4Q9UN74 947 aa15.51■□□□□ 0.07
SOX2-OT-246ENST00000628343 A0A0U1RQG5 324 aaPredicted RBP15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 H0YGN5 161 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 MYL3P08590 195 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 PSMC6P62333 389 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 MTMR1Q13613 665 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 LAMC2Q13753 1193 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 MCTP2Q6DN12 878 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 BLIDQ8IZY5 108 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 PPTC7Q8NI37 304 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 WASF1Q92558 559 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 MXRA8Q9BRK3 442 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 JADE2Q9NQC1 790 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 POLR3EQ9NVU0 708 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 PCDH10Q9P2E7 1040 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 ATP11BQ9Y2G3 1177 aa15.5■□□□□ 0.07
SOX2-OT-246ENST00000628343 GRIN2DO15399 1336 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 FAM86B1E9PN63 330 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 EDIL3O43854 480 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 ATP9AO75110 1047 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 CABYRO75952 493 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 CYP3A4P08684 503 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 FAM86B2P0C5J1 330 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 KCNA2P16389 499 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 HSDL1Q3SXM5 330 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 BRDTQ58F21 947 aaPredicted RBP15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 GALNT17Q6IS24 598 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 CYFIP1Q7L576 1253 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 SLC43A3Q8NBI5 491 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 CDHR1Q96JP9 859 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 SPATA33Q96N06 139 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 SENP7Q9BQF6 1050 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 LLPHQ9BRT6 129 aaKnown RBP15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 TELO2Q9Y4R8 837 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 ALPK3Q96L96 1907 aa15.49■□□□□ 0.07
SOX2-OT-246ENST00000628343 MEIS1O00470 390 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 ARP10275 920 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 HOXD8P13378 290 aaPredicted RBP15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 XBP1P17861 261 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 CDK7P50613 346 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 FOSBP53539 338 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 TLE2Q04725 743 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 ITGA7Q13683 1181 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 NEDD9Q14511 834 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 PRPF38BQ5VTL8 546 aaKnown RBP15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 METTL7BQ6UX53 244 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 ANKRD33Q7Z3H0 272 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 OXER1Q8TDS5 423 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 TMX3Q96JJ7 454 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 MTG1Q9BT17 334 aaPredicted RBP15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 MLXIPQ9HAP2 919 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 KCNH7Q9NS40 1196 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 PKD2L1Q9P0L9 805 aa15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 ZMYND8Q9ULU4 1186 aaPredicted RBP15.48■□□□□ 0.07
SOX2-OT-246ENST00000628343 KIAA1217Q5T5P2 1943 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 IGLV3-22A0A075B6J6 115 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 ARVCFO00192 962 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 MAFGO15525 162 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 KPNA6O60684 536 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 PQBP1O60828 265 aaKnown RBP15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 SYN1P17600 705 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 DGKDQ16760 1214 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 TBCKQ8TEA7 893 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 KAT2BQ92831 832 aa15.47■□□□□ 0.07
SOX2-OT-246ENST00000628343 ZNF286BP0CG31 522 aa15.46■□□□□ 0.07
SOX2-OT-246ENST00000628343 CIITAP33076 1130 aa15.46■□□□□ 0.07
SOX2-OT-246ENST00000628343 ZNF76P36508 570 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms