RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PPP4R3AQ6IN85 833 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 PROCA1Q8NCQ7 364 aaPredicted RBP11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 CRYGNQ8WXF5 182 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 SLC10A4Q96EP9 437 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 SDF4Q9BRK5 362 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 PANK2Q9BZ23 570 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 TSPY26PQ9H489 355 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 GBA2Q9HCG7 927 aaPredicted RBP11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 HOMER2Q9NSB8 354 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 DDX25Q9UHL0 483 aaKnown RBP11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 PTPRFP10586 1907 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 MYPNQ86TC9 1320 aa11.24□□□□□ -0.61
SOX2-OT-244ENST00000627738 CYP3A7-CYP3A51PA0A087WV96 503 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 UNCXA6NJT0 531 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 POLR2DO15514 142 aaKnown RBP11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 CYP3A7P24462 503 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 HOXA7P31268 230 aaPredicted RBP11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 HSD17B4P51659 736 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 OAZ1P54368 228 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 FKBP1BP68106 108 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 LONRF3Q496Y0 759 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 SNRNP48Q6IEG0 339 aaKnown RBP11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 MOXD1Q6UVY6 613 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 KRBA2Q6ZNG9 492 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 MCF2L2Q86YR7 1114 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 PDILTQ8N807 584 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 CNNM3Q8NE01 707 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 MTMR9Q96QG7 549 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 FUCA2Q9BTY2 467 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 RNF146Q9NTX7 359 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 RIPK3Q9Y572 518 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 LOC285556D6RIA3 1793 aa11.23□□□□□ -0.61
SOX2-OT-244ENST00000627738 A0A087X0B3 334 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 RNF40O75150 1001 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 RGS20O76081 388 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 CYP3A4P08684 503 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 CD46P15529 392 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 TECP42680 631 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 TXKP42681 527 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 UBXN2AP68543 259 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 GHRHRQ02643 423 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 MOGSQ13724 837 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 PLS1Q14651 629 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 SKIV2LQ15477 1246 aaKnown RBP11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 FASTKD5Q7L8L6 764 aaKnown RBP11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 C2orf69Q8N8R5 385 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 ERCC4Q92889 916 aaPredicted RBP11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 DHX58Q96C10 678 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 ZFRQ96KR1 1074 aaKnown RBP11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 MBOAT7Q96N66 472 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 EHMT1Q9H9B1 1298 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 SERTAD1Q9UHV2 236 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 AGTPBP1Q9UPW5 1226 aa11.22□□□□□ -0.61
SOX2-OT-244ENST00000627738 COL11A1P12107 1806 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 PP2D1A8MPX8 630 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 MARCH6O60337 910 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 CCDC192P0DO97 292 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 CDC25AP30304 524 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 CIITAP33076 1130 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 DEKP35659 375 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 ZNF76P36508 570 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 TXLNAP40222 546 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 STAT3P40763 770 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 RPS6P62753 249 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 TYRO3Q06418 890 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 SNAPC2Q13487 334 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 TMEM266Q2M3C6 531 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 TKFCQ3LXA3 575 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 Q4G0T1 1027 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 PRR16Q569H4 304 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 SASS6Q6UVJ0 657 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 NSMFQ6X4W1 530 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 LBX2Q6XYB7 198 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 RNF207Q6ZRF8 634 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 SAMD3Q8N6K7 520 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 SYTL5Q8TDW5 730 aaPredicted RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 HAS1Q92839 578 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 GJA10Q969M2 543 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 AK8Q96MA6 479 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 TEX13BQ9BXU2 312 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 RBSNQ9H1K0 784 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 GRPEL1Q9HAV7 217 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 MAP3K20Q9NYL2 800 aaKnown RBP11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 COL20A1Q9P218 1284 aa11.21□□□□□ -0.61
SOX2-OT-244ENST00000627738 RPTORQ8N122 1335 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 FAM86B1E9PN63 330 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 FOXN1O15353 648 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 ACTN4O43707 911 aaKnown RBP11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 PEX10O60683 326 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 FAM86B2P0C5J1 330 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 UBA7P41226 1012 aa11.2□□□□□ -0.62
SOX2-OT-244ENST00000627738 HERVK_113P62684 666 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms