RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PCDHA8Q9Y5H6 950 aa16.81■□□□□ 0.28
PNKP-221ENST00000627317 A0A1W2PPC1 479 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 MMP1P03956 469 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 C6orf222P0C671 652 aaPredicted RBP16.8■□□□□ 0.28
PNKP-221ENST00000627317 MYCLP12524 364 aaPredicted RBP16.8■□□□□ 0.28
PNKP-221ENST00000627317 CCND2P30279 289 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 KRT2P35908 639 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 PGM5Q15124 567 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 SAFBQ15424 915 aaKnown RBP eCLIP16.8■□□□□ 0.28
PNKP-221ENST00000627317 IQSEC1Q6DN90 963 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 TLK2Q86UE8 772 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 PDLIM7Q9NR12 457 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 ATP11BQ9Y2G3 1177 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 Q9Y3F1 56 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 LTBP2Q14767 1821 aa16.8■□□□□ 0.28
PNKP-221ENST00000627317 LAMA2P24043 3122 aaKnown RBP16.79■□□□□ 0.28
PNKP-221ENST00000627317 NR3C2P08235 984 aa16.79■□□□□ 0.28
PNKP-221ENST00000627317 NPY5RQ15761 445 aa16.79■□□□□ 0.28
PNKP-221ENST00000627317 STXBP2Q15833 593 aa16.79■□□□□ 0.28
PNKP-221ENST00000627317 DUSP28Q4G0W2 176 aa16.79■□□□□ 0.28
PNKP-221ENST00000627317 ANKRD33Q7Z3H0 272 aa16.79■□□□□ 0.28
PNKP-221ENST00000627317 IL31RAQ8NI17 732 aa16.79■□□□□ 0.28
PNKP-221ENST00000627317 ELP1O95163 1332 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 H3BQV1 296 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 ADAMTS3O15072 1205 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 ASGR1P07306 291 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 TLE2Q04725 743 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 GNL2Q13823 731 aaKnown RBP16.78■□□□□ 0.28
PNKP-221ENST00000627317 FSCN1Q16658 493 aaKnown RBP16.78■□□□□ 0.28
PNKP-221ENST00000627317 KRT25Q7Z3Z0 450 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 DIS3L2Q8IYB7 885 aaKnown RBP16.78■□□□□ 0.28
PNKP-221ENST00000627317 PCSK9Q8NBP7 692 aaKnown RBP16.78■□□□□ 0.28
PNKP-221ENST00000627317 FBXO18Q8NFZ0 1043 aa16.78■□□□□ 0.28
PNKP-221ENST00000627317 CCDC194A0A1B0GVG4 234 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 TRIM43BA6NCK2 446 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 PDCP20941 246 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 SREBF1P36956 1147 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.28
PNKP-221ENST00000627317 CDK7P50613 346 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 BEX3Q00994 111 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 GNASQ5JWF2 1037 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 PCNX4Q63HM2 1172 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 XRRA1Q6P2D8 792 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 SH3RF1Q7Z6J0 888 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 OXER1Q8TDS5 423 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 TRIM43Q96BQ3 446 aaPredicted RBP16.77■□□□□ 0.28
PNKP-221ENST00000627317 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 SPC25Q9HBM1 224 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 STARD7Q9NQZ5 370 aa16.77■□□□□ 0.28
PNKP-221ENST00000627317 M0R2N6 131 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 EIF3JO75822 258 aaKnown RBP16.76■□□□□ 0.27
PNKP-221ENST00000627317 STAM2O75886 525 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 ARIH2O95376 493 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 ITGB8P26012 769 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 ARHGAP4P98171 946 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 NR5A1Q13285 461 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 NONOQ15233 471 aaKnown RBP eCLIP16.76■□□□□ 0.27
PNKP-221ENST00000627317 LARP1BQ659C4 914 aaKnown RBP16.76■□□□□ 0.27
PNKP-221ENST00000627317 CCDC62Q6P9F0 684 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 VSIG10LQ86VR7 867 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 TOX2Q96NM4 488 aa16.76■□□□□ 0.27
PNKP-221ENST00000627317 GRIN2DO15399 1336 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 BTBD18B2RXH4 712 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 KIAA0355O15063 1070 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 DYNC1LI2O43237 492 aaPredicted RBP16.75■□□□□ 0.27
PNKP-221ENST00000627317 ZNF76P36508 570 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 MDM2Q00987 491 aaPredicted RBP16.75■□□□□ 0.27
PNKP-221ENST00000627317 FAAP100Q0VG06 881 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 GNPTABQ3T906 1256 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 CXCL17Q6UXB2 119 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 SEPT14Q6ZU15 432 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 SPRYD3Q8NCJ5 442 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 SCFD2Q8WU76 684 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 GLT1D1Q96MS3 346 aa16.75■□□□□ 0.27
PNKP-221ENST00000627317 VPS37CA5D8V6 355 aaPredicted RBP16.74■□□□□ 0.27
PNKP-221ENST00000627317 SOX1O00570 391 aaPredicted RBP16.74■□□□□ 0.27
PNKP-221ENST00000627317 PQBP1O60828 265 aaKnown RBP16.74■□□□□ 0.27
PNKP-221ENST00000627317 CLTBP09497 229 aa16.74■□□□□ 0.27
PNKP-221ENST00000627317 MRPS9P82933 396 aaKnown RBP16.74■□□□□ 0.27
PNKP-221ENST00000627317 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
PNKP-221ENST00000627317 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
PNKP-221ENST00000627317 ZFP91Q96JP5 570 aaPredicted RBP16.74■□□□□ 0.27
PNKP-221ENST00000627317 AP5M1Q9H0R1 490 aa16.74■□□□□ 0.27
PNKP-221ENST00000627317 TBX21Q9UL17 535 aa16.74■□□□□ 0.27
PNKP-221ENST00000627317 MRVI1Q9Y6F6 885 aa16.74■□□□□ 0.27
PNKP-221ENST00000627317 MYH7BA7E2Y1 1941 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 A0A0U1RQG5 324 aaPredicted RBP16.73■□□□□ 0.27
PNKP-221ENST00000627317 NKRFO15226 690 aaKnown RBP eCLIP16.73■□□□□ 0.27
PNKP-221ENST00000627317 RGS20O76081 388 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 TTLL4Q14679 1199 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 INF2Q27J81 1249 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 TDHQ8IZJ6 230 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 TNFRSF25Q93038 417 aa16.73■□□□□ 0.27
PNKP-221ENST00000627317 INPP4AQ96PE3 977 aaPredicted RBP16.73■□□□□ 0.27
PNKP-221ENST00000627317 FOXP1Q9H334 677 aaPredicted RBP16.73■□□□□ 0.27
PNKP-221ENST00000627317 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms