RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CLTBP09497 229 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 BMP8BP34820 402 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 SP2Q02086 613 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 AP3B2Q13367 1082 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 NEDD9Q14511 834 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 CDHR1Q96JP9 859 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 GDF15Q99988 308 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 LBHD1Q9BQE6 289 aaPredicted RBP19.17■□□□□ 0.66
UBE3D-208ENST00000626828 MLXIPQ9HAP2 919 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 SH3GLB2Q9NR46 395 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 TMEM39AQ9NV64 488 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 TRIOBPQ9H2D6 2365 aa19.17■□□□□ 0.66
UBE3D-208ENST00000626828 PPFIA3O75145 1194 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 PPFIA4O75335 1185 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 CDKL5O76039 1030 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 DEXIO95424 95 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 GGPS1O95749 300 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 CLK2P49760 499 aaKnown RBP19.16■□□□□ 0.66
UBE3D-208ENST00000626828 FAAP100Q0VG06 881 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 DGKDQ16760 1214 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 CCDC148Q8NFR7 591 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 PPTC7Q8NI37 304 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 BICD2Q8TD16 824 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 GPRASP2Q96D09 838 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 SENP7Q9BQF6 1050 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 PRDM5Q9NQX1 630 aaPredicted RBP19.16■□□□□ 0.66
UBE3D-208ENST00000626828 PDLIM7Q9NR12 457 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 GRIN2DO15399 1336 aa19.16■□□□□ 0.66
UBE3D-208ENST00000626828 TRIM43BA6NCK2 446 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 KIAA0355O15063 1070 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 MMP3P08254 477 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 MAGEA10P43363 369 aaPredicted RBP19.15■□□□□ 0.66
UBE3D-208ENST00000626828 PSMC6P62333 389 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 SCRN1Q12765 414 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 SH3RF1Q7Z6J0 888 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 GIMAP8Q8ND71 665 aaPredicted RBP19.15■□□□□ 0.66
UBE3D-208ENST00000626828 TRIM43Q96BQ3 446 aaPredicted RBP19.15■□□□□ 0.66
UBE3D-208ENST00000626828 SPATA33Q96N06 139 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 C22orf23Q9BZE7 217 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 PRO3102Q9H379 93 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 UBIAD1Q9Y5Z9 338 aa19.15■□□□□ 0.66
UBE3D-208ENST00000626828 UBA1P22314 1058 aaKnown RBP19.14■□□□□ 0.65
UBE3D-208ENST00000626828 JAKMIP3Q5VZ66 844 aa19.14■□□□□ 0.65
UBE3D-208ENST00000626828 FAM126BQ8IXS8 530 aa19.14■□□□□ 0.65
UBE3D-208ENST00000626828 FAM177A1Q8N128 213 aaPredicted RBP19.14■□□□□ 0.65
UBE3D-208ENST00000626828 ANO3Q9BYT9 981 aa19.14■□□□□ 0.65
UBE3D-208ENST00000626828 JADE2Q9NQC1 790 aa19.14■□□□□ 0.65
UBE3D-208ENST00000626828 TMEM260Q9NX78 707 aa19.14■□□□□ 0.65
UBE3D-208ENST00000626828 CD4P01730 458 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 RAG1P15918 1043 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 ITGB5P18084 799 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 NLRP5P59047 1200 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 MDM2Q00987 491 aaPredicted RBP19.13■□□□□ 0.65
UBE3D-208ENST00000626828 PTPN11Q06124 597 aaPredicted RBP19.13■□□□□ 0.65
UBE3D-208ENST00000626828 SEMA3FQ13275 785 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 NBPF20Q3BBV1 942 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 HABP4Q5JVS0 413 aaKnown RBP19.13■□□□□ 0.65
UBE3D-208ENST00000626828 NFRKBQ6P4R8 1299 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 REXO1Q8N1G1 1221 aaKnown RBP19.13■□□□□ 0.65
UBE3D-208ENST00000626828 MXRA8Q9BRK3 442 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 UPF2Q9HAU5 1272 aaKnown RBP19.13■□□□□ 0.65
UBE3D-208ENST00000626828 VPS54Q9P1Q0 977 aa19.13■□□□□ 0.65
UBE3D-208ENST00000626828 SCN10AQ9Y5Y9 1956 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 A0A1W2PPC1 479 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 SUPT20HL2P0C7V6 817 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 ZNF76P36508 570 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 SREBF1P36956 1147 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 RBM25P49756 843 aaKnown RBP19.12■□□□□ 0.65
UBE3D-208ENST00000626828 ME3Q16798 604 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 HSDL1Q3SXM5 330 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 METTL7BQ6UX53 244 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 CYFIP1Q7L576 1253 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 PGBD1Q96JS3 809 aa19.12■□□□□ 0.65
UBE3D-208ENST00000626828 UBE2OQ9C0C9 1292 aaKnown RBP19.12■□□□□ 0.65
UBE3D-208ENST00000626828 NOP56O00567 594 aaKnown RBP19.11■□□□□ 0.65
UBE3D-208ENST00000626828 SORBS3O60504 671 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 TIMP1P01033 207 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 CYP3A4P08684 503 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 HOXD8P13378 290 aaPredicted RBP19.11■□□□□ 0.65
UBE3D-208ENST00000626828 MTMR1Q13613 665 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 CEP55Q53EZ4 464 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 GALNT17Q6IS24 598 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 IL27Q8NEV9 243 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 BADQ92934 168 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 KATNAL1Q9BW62 490 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 BCAS3Q9H6U6 928 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 TBX21Q9UL17 535 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 LIMCH1Q9UPQ0 1083 aa19.11■□□□□ 0.65
UBE3D-208ENST00000626828 MEIS1O00470 390 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 ATP9AO75110 1047 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 XBP1P17861 261 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 ARHGAP4P98171 946 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 FAM47CQ5HY64 1035 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 NECAB1Q8N987 351 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 WASF1Q92558 559 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 KAT2BQ92831 832 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 KIF2CQ99661 725 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 TRPV6Q9H1D0 765 aa19.1■□□□□ 0.65
UBE3D-208ENST00000626828 STK36Q9NRP7 1315 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 PSEN2P49810 448 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms