RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 TXLNBQ8N3L3 684 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 TRIM58Q8NG06 486 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 BAP1Q92560 729 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 SYN2Q92777 582 aaPredicted RBP11.12□□□□□ -0.63
TCF4-254ENST00000626584 SECISBP2LQ93073 1101 aaKnown RBP11.12□□□□□ -0.63
TCF4-254ENST00000626584 MMS19Q96T76 1030 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 NUCKS1Q9H1E3 243 aaKnown RBP11.12□□□□□ -0.63
TCF4-254ENST00000626584 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 NYAP2Q9P242 653 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 HDAC6Q9UBN7 1215 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 JRKLQ9Y4A0 524 aa11.12□□□□□ -0.63
TCF4-254ENST00000626584 TACC1O75410 805 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 GNA14O95837 355 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 NPR1P16066 1061 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 FKBP1AP62942 108 aaKnown RBP11.11□□□□□ -0.63
TCF4-254ENST00000626584 FKBP3Q00688 224 aaKnown RBP11.11□□□□□ -0.63
TCF4-254ENST00000626584 CASP8Q14790 479 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 ASTE1Q2TB18 679 aaPredicted RBP11.11□□□□□ -0.63
TCF4-254ENST00000626584 MAP9Q49MG5 647 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 IQCEQ6IPM2 695 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
TCF4-254ENST00000626584 ZC3H12CQ9C0D7 883 aaKnown RBP11.11□□□□□ -0.63
TCF4-254ENST00000626584 ACBD3Q9H3P7 528 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 PSTPIP2Q9H939 334 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 KCNMB3Q9NPA1 279 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 CALCOCO1Q9P1Z2 691 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 TFR2Q9UP52 801 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 PCDHA2Q9Y5H9 948 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 PCDHA13Q9Y5I0 950 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 COL4A3BPQ9Y5P4 624 aa11.11□□□□□ -0.63
TCF4-254ENST00000626584 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 FRMD3A2A2Y4 597 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 USP17L10C9JJH3 530 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 ENC1O14682 589 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 EPHB6O15197 1021 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 IDEP14735 1019 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 EIF4A3P38919 411 aaKnown RBP11.1□□□□□ -0.63
TCF4-254ENST00000626584 KIF11P52732 1056 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 EIF6P56537 245 aaKnown RBP11.1□□□□□ -0.63
TCF4-254ENST00000626584 AP3B2Q13367 1082 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 CLEC10AQ8IUN9 316 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 CCDC65Q8IXS2 484 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 MMGT1Q8N4V1 131 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 NEK11Q8NG66 645 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 TEKT1Q969V4 418 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
TCF4-254ENST00000626584 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
TCF4-254ENST00000626584 PANK4Q9NVE7 773 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 PCDHA12Q9UN75 941 aa11.1□□□□□ -0.63
TCF4-254ENST00000626584 COL11A2P13942 1736 aaPredicted RBP11.1□□□□□ -0.63
TCF4-254ENST00000626584 AARSP49588 968 aaKnown RBP eCLIP11.09□□□□□ -0.63
TCF4-254ENST00000626584 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 CYP27A1Q02318 531 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 KCNMA1Q12791 1236 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 C2CD5Q86YS7 1000 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 SLFN12Q8IYM2 578 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 CCDC155Q8N6L0 562 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 FAM71BQ8TC56 605 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 CRYGNQ8WXF5 182 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 IFIH1Q9BYX4 1025 aaKnown RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 DHX36Q9H2U1 1008 aaKnown RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 MMRN2Q9H8L6 949 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 PDE11AQ9HCR9 933 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 MED4Q9NPJ6 270 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 CEP72Q9P209 647 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 ADAM21Q9UKJ8 722 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 TRPC5Q9UL62 973 aaPredicted RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 STK24Q9Y6E0 443 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 KIF13BQ9NQT8 1826 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 AFF2P51816 1311 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 LRRC53A6NM62 1247 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 TBX3O15119 743 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 PLEKP08567 350 aaPredicted RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 PLA2G4BP0C869 781 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 ALDH1B1P30837 517 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 MMP14P50281 582 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 QRICH1Q2TAL8 776 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 HGSNATQ68CP4 663 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 TRIM59Q8IWR1 403 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 RNF10Q8N5U6 811 aaKnown RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 IDI2Q9BXS1 227 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 ANO3Q9BYT9 981 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 FAM207AQ9NSI2 230 aaPredicted RBP11.09□□□□□ -0.63
TCF4-254ENST00000626584 FAM184BQ9ULE4 1060 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 DUSP10Q9Y6W6 482 aa11.09□□□□□ -0.63
TCF4-254ENST00000626584 F8W031 263 aaPredicted RBP11.08□□□□□ -0.64
TCF4-254ENST00000626584 PDE2AO00408 941 aaPredicted RBP11.08□□□□□ -0.64
TCF4-254ENST00000626584 MARCH6O60337 910 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms