RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CCDC127Q96BQ5 260 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 SYNDIG1Q9H7V2 258 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 ITM2BQ9Y287 266 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 RRN3P2A6NIE6 340 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 DPEP1P16444 411 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 GMPSP49915 693 aaPredicted RBP12.07□□□□□ -0.48
VPS8-227ENST00000625842 SETDB1Q15047 1291 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 TAF11Q15544 211 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
VPS8-227ENST00000625842 ANGEL2Q5VTE6 544 aaKnown RBP12.07□□□□□ -0.48
VPS8-227ENST00000625842 CCDC25Q86WR0 208 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 OLFML3Q9NRN5 406 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 BAG5Q9UL15 447 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 PPFIA4O75335 1185 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 PHBP35232 272 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 CYP4A11Q02928 519 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 MEI1Q5TIA1 1274 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 STKLD1Q8NE28 680 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 HAUS8Q9BT25 410 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 NOL3O60936 208 aaKnown RBP12.07□□□□□ -0.48
VPS8-227ENST00000625842 APOEP02649 317 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 LMNB2Q03252 620 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 NOGQ13253 232 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 TUBB2AQ13885 445 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 STAG1Q8WVM7 1258 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 TUBB2BQ9BVA1 445 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 VPS33BQ9H267 617 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 CLSTN2Q9H4D0 955 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 ASIC3Q9UHC3 531 aa12.07□□□□□ -0.48
VPS8-227ENST00000625842 SRGAP2CP0DJJ0 459 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ARHGAP44Q17R89 818 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 FYB2Q5VWT5 728 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 BBOF1Q8ND07 529 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 SEPT8Q92599 483 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 PHKBQ93100 1093 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 RNF26Q9BY78 433 aaPredicted RBP12.06□□□□□ -0.48
VPS8-227ENST00000625842 TRIM45Q9H8W5 580 aaPredicted RBP12.06□□□□□ -0.48
VPS8-227ENST00000625842 TADA2AO75478 443 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 HSPA8P11142 646 aaKnown RBP12.06□□□□□ -0.48
VPS8-227ENST00000625842 MTMR1Q13613 665 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 SCARF1Q14162 830 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 NBPF20Q3BBV1 942 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ZNF667Q5HYK9 610 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ERO1BQ86YB8 467 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 PPM1KQ8N3J5 372 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 TESK2Q96S53 571 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 CARD14Q9BXL6 1004 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 SLC38A7Q9NVC3 462 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 CTNND2Q9UQB3 1225 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 GOLGA8QA0A0J9YX86 632 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 GOLGA8OA6NCC3 632 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 GOLGA8NF8WBI6 632 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 TXNP10599 105 aaKnown RBP12.06□□□□□ -0.48
VPS8-227ENST00000625842 CDK8P49336 464 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 DEFB115Q30KQ5 88 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 KIAA1755Q5JYT7 1200 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 THNSL1Q8IYQ7 743 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ZNF302Q9NR11 478 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 TBC1D7Q9P0N9 293 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 HECW2Q9P2P5 1572 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ROBO2Q9HCK4 1378 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 E7EWF7 191 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 BNIP3LO60238 219 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 ATP6V1E1P36543 226 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 RAD51AP2Q09MP3 1159 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 PPP1R18Q6NYC8 613 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 CHST13Q8NET6 341 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 SLC13A4Q9UKG4 626 aa12.06□□□□□ -0.48
VPS8-227ENST00000625842 UTP11Q9Y3A2 253 aaKnown RBP12.06□□□□□ -0.48
VPS8-227ENST00000625842 TMEM247A6NEH6 219 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 MAP3K13O43283 966 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 GOLGA8HP0CJ92 632 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 CHRNA5P30532 468 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 OR6B3Q8NGW1 331 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 TM6SF1Q9BZW5 370 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 GSTA1P08263 222 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 GSTA2P09210 222 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 MAN1A1P33908 653 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 DNAJC21Q5F1R6 531 aaKnown RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 CYP4A22Q5TCH4 519 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 PCDHB7Q9Y5E2 793 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 CDHR2Q9BYE9 1310 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 I3L4J1 428 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 PRRG1O14668 218 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 DYNC1LI2O43237 492 aaPredicted RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 TECP42680 631 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 BSPRYQ5W0U4 402 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 COLEC11Q9BWP8 271 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 SMARCAD1Q9H4L7 1026 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 ZBTB40Q9NUA8 1239 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 AKR1B15C9JRZ8 316 aaPredicted RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 PSMC2P35998 433 aaKnown RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 PTK2BQ14289 1009 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms