RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 KCNMB3Q9NPA1 279 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 SLC5A4Q9NY91 659 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 XRCC5P13010 732 aaKnown RBP18.82■□□□□ 0.6
CCNA1-203ENST00000625767 GCFC2P16383 781 aaKnown RBP18.82■□□□□ 0.6
CCNA1-203ENST00000625767 ATP2C1P98194 919 aaPredicted RBP18.82■□□□□ 0.6
CCNA1-203ENST00000625767 SP2Q02086 613 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 MTMR1Q13613 665 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 SLC39A14Q15043 492 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 STK38Q15208 465 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 TELO2Q9Y4R8 837 aa18.82■□□□□ 0.6
CCNA1-203ENST00000625767 DNAH12Q6ZR08 3092 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 SYNGAP1Q96PV0 1343 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 ITGB3BPQ13352 177 aaPredicted RBP18.81■□□□□ 0.6
CCNA1-203ENST00000625767 CALCRLQ16602 461 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 GJC2Q5T442 439 aaPredicted RBP18.81■□□□□ 0.6
CCNA1-203ENST00000625767 OLFML2BQ68BL8 750 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 TAPT1Q6NXT6 567 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 XRRA1Q6P2D8 792 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 SPATA32Q96LK8 384 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 CFAP45Q9UL16 551 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 PTCH2Q9Y6C5 1203 aa18.81■□□□□ 0.6
CCNA1-203ENST00000625767 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.8■□□□□ 0.6
CCNA1-203ENST00000625767 ADCY6O43306 1168 aa18.8■□□□□ 0.6
CCNA1-203ENST00000625767 HOXD10P28358 340 aa18.8■□□□□ 0.6
CCNA1-203ENST00000625767 CLIC6Q96NY7 704 aa18.8■□□□□ 0.6
CCNA1-203ENST00000625767 AGO4Q9HCK5 861 aaKnown RBP18.8■□□□□ 0.6
CCNA1-203ENST00000625767 RCOR1Q9UKL0 485 aa18.8■□□□□ 0.6
CCNA1-203ENST00000625767 SPATA31C2B4DYI2 1134 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 SPTLC2O15270 562 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 ADCY3O60266 1144 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 YEATS4O95619 227 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 OR52Z1P0C646 297 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 ADCYAP1R1P41586 468 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 TXKP42681 527 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 IRF5Q13568 498 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 LY6KQ17RY6 165 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 ATL3Q6DD88 541 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 CLEC17AQ6ZS10 378 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 NIPA1Q7RTP0 329 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 TRPV1Q8NER1 839 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 RAET1EQ8TD07 263 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 GPRASP2Q96D09 838 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 FBXO2Q9UK22 296 aaPredicted RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 WDR81Q562E7 1941 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 LOC102724159A0A0B4J2E5 919 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 DDX39AO00148 427 aaKnown RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 IPO5O00410 1097 aaKnown RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 STAM2O75886 525 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 KCNA2P16389 499 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 SETQ01105 290 aaPredicted RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 ACVR2BQ13705 512 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 PWP2Q15269 919 aaKnown RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 SPECC1Q5M775 1068 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 COPS5Q92905 334 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 LENG1Q96BZ8 264 aaPredicted RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 MPHOSPH6Q99547 160 aaKnown RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 NAP1L4Q99733 375 aaKnown RBP18.79■□□□□ 0.6
CCNA1-203ENST00000625767 ZNF577Q9BSK1 485 aa18.79■□□□□ 0.6
CCNA1-203ENST00000625767 VWA3AA6NCI4 1184 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 B4DLN1 442 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 DHX15O43143 795 aaKnown RBP18.78■□□□□ 0.6
CCNA1-203ENST00000625767 GNRH1P01148 92 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 ZNF865P0CJ78 1059 aaPredicted RBP18.78■□□□□ 0.6
CCNA1-203ENST00000625767 ORC2Q13416 577 aaPredicted RBP18.78■□□□□ 0.6
CCNA1-203ENST00000625767 GNPTABQ3T906 1256 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 NLRX1Q86UT6 975 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 MSL3Q8N5Y2 521 aaKnown RBP18.78■□□□□ 0.6
CCNA1-203ENST00000625767 SLC5A5Q92911 643 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 PCDHA7Q9UN72 937 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 CEP131Q9UPN4 1083 aa18.78■□□□□ 0.6
CCNA1-203ENST00000625767 PP2D1A8MPX8 630 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 GADD45BO75293 160 aaPredicted RBP18.77■□□□□ 0.6
CCNA1-203ENST00000625767 UBA1P22314 1058 aaKnown RBP18.77■□□□□ 0.6
CCNA1-203ENST00000625767 ICAM3P32942 547 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 TECP42680 631 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 CACNB2Q08289 660 aaPredicted RBP18.77■□□□□ 0.6
CCNA1-203ENST00000625767 CCDC144BQ3MJ40 725 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 CCDC62Q6P9F0 684 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 SCAND2PQ9GZW5 306 aaPredicted RBP18.77■□□□□ 0.6
CCNA1-203ENST00000625767 ABHD16BQ9H3Z7 469 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
CCNA1-203ENST00000625767 VTA1Q9NP79 307 aa18.77■□□□□ 0.6
CCNA1-203ENST00000625767 POTEMA6NI47 508 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 MARCH6O60337 910 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 PSMD10O75832 226 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 CDC25AP30304 524 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 CTCFP49711 727 aaPredicted RBP18.76■□□□□ 0.59
CCNA1-203ENST00000625767 SPIRE1Q08AE8 756 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 SH3TC2Q8TF17 1288 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 DDX41Q9UJV9 622 aaKnown RBP18.76■□□□□ 0.59
CCNA1-203ENST00000625767 VAV3Q9UKW4 847 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 POTEFA5A3E0 1075 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 CHMP2AO43633 222 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 PPP6R2O75170 966 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 ME1P48163 572 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 SP4Q02446 784 aa18.76■□□□□ 0.59
CCNA1-203ENST00000625767 AXDND1Q5T1B0 1012 aaPredicted RBP18.76■□□□□ 0.59
CCNA1-203ENST00000625767 LRCH2Q5VUJ6 765 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms