RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 DGKHQ86XP1 1220 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 REPS2Q8NFH8 660 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 PAWRQ96IZ0 340 aaKnown RBP7.49□□□□□ -1.21
TCF4-249ENST00000625716 MAML3Q96JK9 1138 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 GAS2L1Q99501 681 aaPredicted RBP7.49□□□□□ -1.21
TCF4-249ENST00000625716 ZKSCAN3Q9BRR0 538 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 HOMER2Q9NSB8 354 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 FLRT1Q9NZU1 646 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 DDX20Q9UHI6 824 aaKnown RBP7.49□□□□□ -1.21
TCF4-249ENST00000625716 CNPY2Q9Y2B0 182 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 DIS3Q9Y2L1 958 aaKnown RBP7.49□□□□□ -1.21
TCF4-249ENST00000625716 TACC3Q9Y6A5 838 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 NEDD4P46934 1319 aa7.49□□□□□ -1.21
TCF4-249ENST00000625716 B4E1Z4 1266 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 ALAS1P13196 640 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 NOVP48745 357 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 CENPCQ03188 943 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 ZNF792Q3KQV3 632 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 WDR44Q5JSH3 913 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 GPATCH4Q5T3I0 446 aaKnown RBP7.48□□□□□ -1.21
TCF4-249ENST00000625716 SYDE2Q5VT97 1194 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 RALYLQ86SE5 291 aaKnown RBP7.48□□□□□ -1.21
TCF4-249ENST00000625716 MSL3Q8N5Y2 521 aaKnown RBP7.48□□□□□ -1.21
TCF4-249ENST00000625716 ARRDC4Q8NCT1 418 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 TRERF1Q96PN7 1200 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 ZSCAN10Q96SZ4 725 aaPredicted RBP7.48□□□□□ -1.21
TCF4-249ENST00000625716 TINF2Q9BSI4 451 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 ESYT1Q9BSJ8 1104 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 C11orf49Q9H6J7 331 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 ACAD9Q9H845 621 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 NRBP1Q9UHY1 535 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 PNMA2Q9UL42 364 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 OGDHLQ9ULD0 1010 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 CCPG1Q9ULG6 757 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 PRR12Q9ULL5 1215 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 RIPK3Q9Y572 518 aa7.48□□□□□ -1.21
TCF4-249ENST00000625716 GREB1LQ9C091 1923 aaPredicted RBP7.48□□□□□ -1.21
TCF4-249ENST00000625716 FRMPD2Q68DX3 1309 aaPredicted RBP7.48□□□□□ -1.21
TCF4-249ENST00000625716 KBTBD13C9JR72 458 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 SGSM2O43147 1006 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 SEPT4O43236 478 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 DHX16O60231 1041 aaKnown RBP7.47□□□□□ -1.21
TCF4-249ENST00000625716 STAU1O95793 577 aaKnown RBP7.47□□□□□ -1.21
TCF4-249ENST00000625716 CYBAP13498 195 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 IRS1P35568 1242 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 SLC16A2P36021 539 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 SNAP25P60880 206 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 SART3Q15020 963 aaKnown RBP7.47□□□□□ -1.21
TCF4-249ENST00000625716 PRAMEF19Q5SWL8 479 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 IFIT1BQ5T764 474 aaKnown RBP7.47□□□□□ -1.21
TCF4-249ENST00000625716 TTBK2Q6IQ55 1244 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 BTNL9Q6UXG8 535 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 UBE2Q1Q7Z7E8 422 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 NCOA7Q8NI08 942 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 DIS3LQ8TF46 1054 aaKnown RBP7.47□□□□□ -1.21
TCF4-249ENST00000625716 RNF146Q9NTX7 359 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 ZSWIM5Q9P217 1185 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 PLXNB2O15031 1838 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 PFASO15067 1338 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 TNKSO95271 1327 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 A0A0G2JMZ2 1700 aa7.47□□□□□ -1.21
TCF4-249ENST00000625716 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 ASB14A6NK59 587 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 IFIT3O14879 490 aaKnown RBP7.46□□□□□ -1.22
TCF4-249ENST00000625716 ICAM1P05362 532 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 PARP1P09874 1014 aaKnown RBP7.46□□□□□ -1.22
TCF4-249ENST00000625716 GOLGA8HP0CJ92 632 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 RARBP10826 455 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 PDHBP11177 359 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 PTH1RQ03431 593 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 ZNF543Q08ER8 600 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 NSMFQ6X4W1 530 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 RASGRP2Q7LDG7 609 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 ENAHQ8N8S7 591 aaPredicted RBP7.46□□□□□ -1.22
TCF4-249ENST00000625716 TRPV1Q8NER1 839 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 ZNF592Q92610 1267 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 ANKS1AQ92625 1134 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 MPHOSPH6Q99547 160 aaKnown RBP7.46□□□□□ -1.22
TCF4-249ENST00000625716 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 SENP6Q9GZR1 1112 aaPredicted RBP7.46□□□□□ -1.22
TCF4-249ENST00000625716 IL25Q9H293 177 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 RANBP17Q9H2T7 1088 aaKnown RBP7.46□□□□□ -1.22
TCF4-249ENST00000625716 TIMMDC1Q9NPL8 285 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 FAM184BQ9ULE4 1060 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 MYH4Q9Y623 1939 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 SYNGAP1Q96PV0 1343 aa7.46□□□□□ -1.22
TCF4-249ENST00000625716 RLFQ13129 1914 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 DNAJC25-GNG10A0A024R161 153 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 PTPDC1A2A3K4 754 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 E7EWF7 191 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 H0YGN5 161 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 DNM1LO00429 736 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 F11P03951 625 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 CENPBP07199 599 aaPredicted RBP7.45□□□□□ -1.22
TCF4-249ENST00000625716 CYP21A2P08686 494 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 AKR1A1P14550 325 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 UBAP2LQ14157 1087 aaKnown RBP7.45□□□□□ -1.22
TCF4-249ENST00000625716 ASPRV1Q53RT3 343 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 GJC2Q5T442 439 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms