RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 MSL3Q8N5Y2 521 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 U2AF1L4Q8WU68 220 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 CLEC4DQ8WXI8 215 aa8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 REPIN1Q9BWE0 567 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 SLKQ9H2G2 1235 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-221ENST00000625705 CNTNAP5Q8WYK1 1306 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 SYNGAP1Q96PV0 1343 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 PPP1R11O60927 126 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 CDKL5O76039 1030 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 FARP2O94887 1054 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 RARBP10826 455 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 CYBAP13498 195 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 AKR1A1P14550 325 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 EN2P19622 333 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 PDIA3P30101 505 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 HOXA13P31271 388 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 GJA8P48165 433 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 ALDH5A1P51649 535 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 AK2P54819 239 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 TOB2Q14106 344 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 MAP3K21Q5TCX8 1036 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 FAM133AQ8N9E0 248 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 CCDC12Q8WUD4 166 aaPredicted RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 SYMPKQ92797 1274 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 GPKOWQ92917 476 aaPredicted RBP eCLIP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 PURBQ96QR8 312 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 SLC26A6Q9BXS9 759 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 ABHD16BQ9H3Z7 469 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 EHMT1Q9H9B1 1298 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 SPC25Q9HBM1 224 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 NCOA5Q9HCD5 579 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 TOR4AQ9NXH8 423 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 DDX20Q9UHI6 824 aaKnown RBP8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 NRBP1Q9UHY1 535 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 FAM184BQ9ULE4 1060 aa8.31□□□□□ -1.08
NPLOC4-221ENST00000625705 SPDYE3A6NKU9 549 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 KBTBD13C9JR72 458 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 hCG_1984214I3L0E3 225 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 SEPT4O43236 478 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 SGPL1O95470 568 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 MYCLP12524 364 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 EIF2AK2P19525 551 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 CDC27P30260 824 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 ADD1P35611 737 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 ADCY7P51828 1080 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 MLLT1Q03111 559 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 SSRP1Q08945 709 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 ACVR2BQ13705 512 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 SLC35G1Q2M3R5 365 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 FBXO16Q8IX29 292 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 FBXL16Q8N461 479 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 ZNF713Q8N859 430 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 RGS22Q8NE09 1264 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 DNERQ8NFT8 737 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 SYTL5Q8TDW5 730 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 NSUN6Q8TEA1 469 aaKnown RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 PHKBQ93100 1093 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 ZNF274Q96GC6 653 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 RMDN3Q96TC7 470 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 AGXT2Q9BYV1 514 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 PSTPIP2Q9H939 334 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 XPNPEP3Q9NQH7 507 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 PAK6Q9NQU5 681 aaPredicted RBP8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 AAASQ9NRG9 546 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 FRMPD3Q5JV73 1810 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 MCM3APO60318 1980 aa8.3□□□□□ -1.08
NPLOC4-221ENST00000625705 LRRC37A2A6NM11 1700 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 LOC102724159A0A0B4J2E5 919 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 SNAI1O95863 264 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 SCG2P13521 617 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 CAPN2P17655 700 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 CCND2P30279 289 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 TNFAIP2Q03169 654 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 PWP2Q15269 919 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 RABEP1Q15276 862 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 CCDC144BQ3MJ40 725 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 WWC2Q6AWC2 1192 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 MAMDC4Q6UXC1 1216 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 SAMD3Q8N6K7 520 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 ARRDC4Q8NCT1 418 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 TRPV1Q8NER1 839 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 CCDC148Q8NFR7 591 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 TBC1D5Q92609 795 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 TAAR1Q96RJ0 339 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 RNF26Q9BY78 433 aaPredicted RBP8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 MAF1Q9H063 256 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 AP5M1Q9H0R1 490 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 VTA1Q9NP79 307 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 MAP3K20Q9NYL2 800 aaKnown RBP8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 NID2Q14112 1375 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 SMCHD1A6NHR9 2005 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 LCTP09848 1927 aa8.29□□□□□ -1.08
NPLOC4-221ENST00000625705 PRPF3O43395 683 aaKnown RBP8.28□□□□□ -1.08
NPLOC4-221ENST00000625705 C6orf222P0C671 652 aaPredicted RBP8.28□□□□□ -1.08
NPLOC4-221ENST00000625705 IFNAR1P17181 557 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms