RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MSANTD4Q8NCY6 345 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 SEPT1Q8WYJ6 367 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 TAF4BQ92750 862 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 KLRG1Q96E93 195 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 MED10Q9BTT4 135 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 SENP6Q9GZR1 1112 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-229ENST00000622668 PXDNLA1KZ92 1463 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 STRNO43815 780 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 ELMSAN1Q6PJG2 1045 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 FAM163AQ96GL9 167 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-229ENST00000622668 DEFB118Q96PH6 123 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 USP28Q96RU2 1077 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 CCDC94Q9BW85 323 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-229ENST00000622668 GTPBP4Q9BZE4 634 aaKnown RBP10.06□□□□□ -0.8
HDAC9-229ENST00000622668 SALL1Q9NSC2 1324 aa10.06□□□□□ -0.8
HDAC9-229ENST00000622668 ACTN1P12814 892 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 CPT1AP50416 773 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 POLD4Q9HCU8 107 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 KNDC1Q76NI1 1749 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 ATF7P17544 494 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-229ENST00000622668 CSGALNACT2Q8N6G5 542 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 XPNPEP3Q9NQH7 507 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 PCDHA10Q9Y5I2 948 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 P4HA1P13674 534 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 SFPQP23246 707 aaKnown RBP eCLIP10.05□□□□□ -0.8
HDAC9-229ENST00000622668 SHMT1P34896 483 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-229ENST00000622668 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
HDAC9-229ENST00000622668 SPRYD7Q5W111 196 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
HDAC9-229ENST00000622668 CLIC6Q96NY7 704 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 TAAR1Q96RJ0 339 aa10.05□□□□□ -0.8
HDAC9-229ENST00000622668 FOXP1Q9H334 677 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-229ENST00000622668 CA12O43570 354 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 MMP1P03956 469 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 TRAPPC10P48553 1259 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 DGKDQ16760 1214 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 MRC1P22897 1456 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 FAM26FQ5R3K3 315 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 CEP57Q86XR8 500 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 SRBD1Q8N5C6 995 aaKnown RBP10.04□□□□□ -0.8
HDAC9-229ENST00000622668 TCP11Q8WWU5 503 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 HTATIP2Q9BUP3 242 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 PIDD1Q9HB75 910 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 TMEM39AQ9NV64 488 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 TMCO5BA8MYB1 307 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 CYP2C9P11712 490 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 ELNP15502 786 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 DSG3P32926 999 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 PTGER2P43116 358 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 PEX3P56589 373 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 FAM160A1Q05DH4 1040 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 LRMPQ12912 555 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 MAPK6Q16659 721 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 DEFB128Q7Z7B8 93 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 EEF2KMTQ96G04 330 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 PANK4Q9NVE7 773 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 BARHL2Q9NY43 387 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
HDAC9-229ENST00000622668 ICAM1P05362 532 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 GRK4P32298 578 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 DEKP35659 375 aaKnown RBP10.04□□□□□ -0.8
HDAC9-229ENST00000622668 PHKA2P46019 1235 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 NOX5Q96PH1 765 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 GCOM2Q9BZD3 368 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-229ENST00000622668 SMARCAD1Q9H4L7 1026 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
HDAC9-229ENST00000622668 POTEMA6NI47 508 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 ZNF202O95125 648 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 EGFRP00533 1210 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 CDC27P30260 824 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 QARSP47897 775 aaKnown RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 PRPF4BQ13523 1007 aaKnown RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 VGLL2Q8N8G2 317 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 NEK11Q8NG66 645 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 LARP4BQ92615 738 aaKnown RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 MTA3Q9BTC8 594 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 MRIQ9BWK5 157 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 JMJD4Q9H9V9 463 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 POLR3EQ9NVU0 708 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 KRT9P35527 623 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 THPOP40225 353 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 FSTL1Q12841 308 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 SLC51AQ86UW1 340 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 LEO1Q8WVC0 666 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 DNAJC25Q9H1X3 360 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 SLC39A2Q9NP94 309 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 CTNND2Q9UQB3 1225 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 BTBD19C9JJ37 291 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 EIF3JO75822 258 aaKnown RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 TDP2O95551 362 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 PRKAR2AP13861 404 aaKnown RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 AKR1A1P14550 325 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 SFNP31947 248 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 PRELPP51888 382 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms