RNA–Protein interactions for RNA: ENST00000622383.1

NKX2-3-202, Transcript of NK2 homeobox 3, humanhuman

TSL 5 BASIC

Gene NKX2-3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-202ENST00000622383 SREBF1P36956 1147 aa25.38■■□□□ 1.65
NKX2-3-202ENST00000622383 TSR1Q2NL82 804 aaKnown RBP25.38■■□□□ 1.65
NKX2-3-202ENST00000622383 PRR16Q569H4 304 aa25.38■■□□□ 1.65
NKX2-3-202ENST00000622383 FKBP15Q5T1M5 1219 aa25.38■■□□□ 1.65
NKX2-3-202ENST00000622383 SPICE1Q8N0Z3 855 aa25.38■■□□□ 1.65
NKX2-3-202ENST00000622383 GMLQ99445 158 aa25.38■■□□□ 1.65
NKX2-3-202ENST00000622383 A0A1W2PQJ5 194 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 CLRN2A0PK11 232 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 SSBP05455 408 aaKnown RBP eCLIP25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 ECE1P42892 770 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 CLCN6P51797 869 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 ZCWPW2Q504Y3 356 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 MYOCDQ8IZQ8 938 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 FGFBP2Q9BYJ0 223 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 NDST4Q9H3R1 872 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 MYO1AQ9UBC5 1043 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 PRR12Q9ULL5 1215 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 PCDHA2Q9Y5H9 948 aa25.37■■□□□ 1.65
NKX2-3-202ENST00000622383 FAM86B1E9PN63 330 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 FGFR1OPO95684 399 aaKnown RBP25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 FOSP01100 380 aaPredicted RBP25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 FAM86B2P0C5J1 330 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 HERVK_113P62684 666 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 KIAA1755Q5JYT7 1200 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 PDGFDQ9GZP0 370 aaPredicted RBP25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 BMP2KQ9NSY1 1161 aaPredicted RBP25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 SIK3Q9Y2K2 1263 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 TBX3O15119 743 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 RAD17O75943 681 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 MAN2A1Q16706 1144 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 FAM26FQ5R3K3 315 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 PCMTD1Q96MG8 357 aaPredicted RBP25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 TMOD2Q9NZR1 351 aa25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 ZNF70Q9UC06 446 aaPredicted RBP25.36■■□□□ 1.65
NKX2-3-202ENST00000622383 NPHP3-ACAD11A0A0J9YXS1 232 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 CTAGE9A4FU28 777 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 SPDYE3A6NKU9 549 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 PSMD14O00487 310 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 VIL1P09327 827 aaKnown RBP25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 CYP11B2P19099 503 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 ACER1Q8TDN7 264 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 TRIM10Q9UDY6 481 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 CDC23Q9UJX2 597 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 HOXA13P31271 388 aaPredicted RBP25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 CIITAP33076 1130 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 GPBP1Q86WP2 473 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 FAM151AQ8WW52 585 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 TSG101Q99816 390 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 EPC1Q9H2F5 836 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 FAM53CQ9NYF3 392 aa25.35■■□□□ 1.65
NKX2-3-202ENST00000622383 CNTNAP1P78357 1384 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 POTEFA5A3E0 1075 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 POTEIP0CG38 1075 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 SLC12A3P55017 1021 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 ARSHQ5FYA8 562 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 POTEGQ6S5H5 508 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 POTEEQ6S8J3 1075 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 CATSPER3Q86XQ3 398 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 TTLL6Q8N841 843 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 PSMD1Q99460 953 aa25.34■■□□□ 1.65
NKX2-3-202ENST00000622383 EPHB6O15197 1021 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 KIF4BQ2VIQ3 1234 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 GRIPAP1Q4V328 841 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 CCDC65Q8IXS2 484 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 RTKN2Q8IZC4 609 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 UBE2Q2Q8WVN8 375 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 NHEJ1Q9H9Q4 299 aaPredicted RBP25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 ZNHIT6Q9NWK9 470 aaKnown RBP25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 TBC1D7Q9P0N9 293 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 TMX2Q9Y320 296 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 COL4A5P29400 1685 aa25.33■■□□□ 1.65
NKX2-3-202ENST00000622383 PIK3CDO00329 1044 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 SPATA31C1P0DKV0 1188 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 CDK17Q00537 523 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 CACNB1Q02641 598 aaPredicted RBP25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 TUBB2AQ13885 445 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 DLGAP5Q15398 846 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 HAUS3Q68CZ6 603 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 IQCDQ96DY2 449 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 NAPGQ99747 312 aaPredicted RBP25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 TUBB2BQ9BVA1 445 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 HAUS4Q9H6D7 363 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 ARHGEF10LQ9HCE6 1279 aa25.33■■□□□ 1.64
NKX2-3-202ENST00000622383 FRMD3A2A2Y4 597 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 STAT2P52630 851 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 TEX35Q5T0J7 233 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 ZNF662Q6ZS27 426 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 SRGAP1Q7Z6B7 1085 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 CCDC170Q8IYT3 715 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 GPR161Q8N6U8 529 aaKnown RBP25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 CYP2W1Q8TAV3 490 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 FAM20AQ96MK3 541 aa25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 ZNF277Q9NRM2 450 aaPredicted RBP25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 ZBTB12Q9Y330 459 aaPredicted RBP25.32■■□□□ 1.64
NKX2-3-202ENST00000622383 MSH4O15457 936 aa25.31■■□□□ 1.64
NKX2-3-202ENST00000622383 CYP3A4P08684 503 aa25.31■■□□□ 1.64
NKX2-3-202ENST00000622383 HNRNPH3P31942 346 aaKnown RBP25.31■■□□□ 1.64
NKX2-3-202ENST00000622383 PSMC6P62333 389 aa25.31■■□□□ 1.64
NKX2-3-202ENST00000622383 FKBP3Q00688 224 aaKnown RBP25.31■■□□□ 1.64
NKX2-3-202ENST00000622383 SPDYE2Q495Y8 402 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms