RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 MTA1Q13330 715 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 WDR59Q6PJI9 974 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 TRMT1LQ7Z2T5 733 aaKnown RBP11.81□□□□□ -0.52
CDH1-214ENST00000621016 DNAAF5Q86Y56 855 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 REXO1Q8N1G1 1221 aaKnown RBP11.81□□□□□ -0.52
CDH1-214ENST00000621016 CALML4Q96GE6 196 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 NUDT12Q9BQG2 462 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 NYXQ9GZU5 481 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 C6orf50Q9HD87 102 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 SAR1BQ9Y6B6 198 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 MYH13Q9UKX3 1938 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 LRRIQ3A6PVS8 624 aaPredicted RBP11.81□□□□□ -0.52
CDH1-214ENST00000621016 EPHB6O15197 1021 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 RTN2O75298 545 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 HERVK_113P62684 666 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 TMEM62Q0P6H9 643 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 SPA17Q15506 151 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 ACCSLQ4AC99 568 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 BEND6Q5SZJ8 279 aaPredicted RBP11.81□□□□□ -0.52
CDH1-214ENST00000621016 KCTD1Q719H9 257 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 DGKHQ86XP1 1220 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 PROCA1Q8NCQ7 364 aaPredicted RBP11.81□□□□□ -0.52
CDH1-214ENST00000621016 LMBR1Q8WVP7 490 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 TRIM9Q9C026 710 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 KLC4Q9NSK0 619 aa11.81□□□□□ -0.52
CDH1-214ENST00000621016 LRP6O75581 1613 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 NCK2O43639 380 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 TCP10Q12799 353 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 PREPLQ4J6C6 727 aaPredicted RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 TTBK2Q6IQ55 1244 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 CACNA2D4Q7Z3S7 1137 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 NEK8Q86SG6 692 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 P2RX5Q93086 422 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 TSGA10Q9BZW7 698 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 COQ9O75208 318 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 MOCS3O95396 460 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 MAGEA10P43363 369 aaPredicted RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 ARL6IP4Q66PJ3 421 aaKnown RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 WDR66Q8TBY9 1149 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 DUSP9Q99956 384 aaKnown RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 NARFQ9UHQ1 456 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 G3V3G9 751 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 KRT86O43790 486 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 KLRC4O43908 158 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 EZRP15311 586 aaKnown RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 GNAQP50148 359 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 GPSM2P81274 684 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 GRM4Q14833 912 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 EZH2Q15910 746 aaKnown RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 CALCRLQ16602 461 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 DCAF8Q5TAQ9 597 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 DPP8Q6V1X1 898 aaPredicted RBP11.8□□□□□ -0.52
CDH1-214ENST00000621016 SNX29Q8TEQ0 813 aa11.8□□□□□ -0.52
CDH1-214ENST00000621016 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDH1-214ENST00000621016 MAP2K7O14733 419 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 SLC37A4O43826 429 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 TAL1P17542 331 aaPredicted RBP11.79□□□□□ -0.52
CDH1-214ENST00000621016 TPP2P29144 1249 aaPredicted RBP11.79□□□□□ -0.52
CDH1-214ENST00000621016 IKQ13123 557 aaPredicted RBP11.79□□□□□ -0.52
CDH1-214ENST00000621016 DOK7Q18PE1 504 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 TTI2Q6NXR4 508 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 ZNF804AQ7Z570 1209 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 B4GALNT2Q8NHY0 566 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
CDH1-214ENST00000621016 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 LRRC10BA6NIK2 292 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 PECAM1P16284 738 aaPredicted RBP11.79□□□□□ -0.52
CDH1-214ENST00000621016 DNM2P50570 870 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 BRD3Q15059 726 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 SV2BQ7L1I2 683 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 MAF1Q9H063 256 aa11.79□□□□□ -0.52
CDH1-214ENST00000621016 ITGB4P16144 1822 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 NPHP3-ACAD11A0A0J9YXS1 232 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 TRAF5O00463 557 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 NDUFAB1O14561 156 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 KRT18P05783 430 aaKnown RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 FGRP09769 529 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 CNGA1P29973 690 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 CYLC1P35663 651 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 RAB27AP51159 221 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 GNGT1P63211 74 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 LAMB3Q13751 1172 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 ZSCAN29Q8IWY8 852 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 GIMAP8Q8ND71 665 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 HDAC7Q8WUI4 952 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 IFIH1Q9BYX4 1025 aaKnown RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 MYH8P13535 1937 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 MYMKA6NI61 221 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 SEMA3EO15041 775 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 PCP11498 1178 aaKnown RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 GNA11P29992 359 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 KCNK18Q7Z418 384 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 ATL2Q8NHH9 583 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 FAM167BQ9BTA0 163 aa11.78□□□□□ -0.52
CDH1-214ENST00000621016 CDCA7Q9BWT1 371 aaPredicted RBP11.78□□□□□ -0.52
CDH1-214ENST00000621016 SEMA6BQ9H3T3 888 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms