RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 SPATA31C2B4DYI2 1134 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 ZEB2O60315 1214 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 ITGB5P18084 799 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 UBA1P22314 1058 aaKnown RBP20.88■□□□□ 0.93
LITAF-220ENST00000620789 SEMA3FQ13275 785 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 NPY5RQ15761 445 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 BLIDQ8IZY5 108 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 GPRASP2Q96D09 838 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 KCNJ14Q9UNX9 436 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 ALPK3Q96L96 1907 aa20.88■□□□□ 0.93
LITAF-220ENST00000620789 A6NJR5 290 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 ATN1P54259 1190 aaPredicted RBP20.87■□□□□ 0.93
LITAF-220ENST00000620789 ARHGAP4P98171 946 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 SP2Q02086 613 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 LRRC26Q2I0M4 334 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 BRDTQ58F21 947 aaPredicted RBP20.87■□□□□ 0.93
LITAF-220ENST00000620789 DHX37Q8IY37 1157 aaKnown RBP20.87■□□□□ 0.93
LITAF-220ENST00000620789 CRYGNQ8WXF5 182 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 DPF3Q92784 378 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 EMID1Q96A84 441 aaPredicted RBP20.87■□□□□ 0.93
LITAF-220ENST00000620789 TMX3Q96JJ7 454 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 CDHR1Q96JP9 859 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 GLT1D1Q96MS3 346 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 GJB4Q9NTQ9 266 aa20.87■□□□□ 0.93
LITAF-220ENST00000620789 M0R2N6 131 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 GGPS1O95749 300 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 MTMR1Q13613 665 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 LAMC2Q13753 1193 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 CELF3Q5SZQ8 465 aaKnown RBP20.86■□□□□ 0.93
LITAF-220ENST00000620789 SLC39A5Q6ZMH5 540 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 MXRA8Q9BRK3 442 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 JADE2Q9NQC1 790 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 STARD7Q9NQZ5 370 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 PDE4DIPQ5VU43 2346 aa20.86■□□□□ 0.93
LITAF-220ENST00000620789 ELP1O95163 1332 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 MAFGO15525 162 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 CABYRO75952 493 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 CYP3A4P08684 503 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 HMGN5P82970 282 aaKnown RBP20.85■□□□□ 0.93
LITAF-220ENST00000620789 NEDD9Q14511 834 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 SNX17Q15036 470 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 CEP55Q53EZ4 464 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 MYSM1Q5VVJ2 828 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 CXCL17Q6UXB2 119 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 AFG1LQ8WV93 481 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 SENP7Q9BQF6 1050 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 POLR3EQ9NVU0 708 aa20.85■□□□□ 0.93
LITAF-220ENST00000620789 EVI5O60447 810 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 MMP3P08254 477 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 PURAQ00577 322 aaKnown RBP20.84■□□□□ 0.93
LITAF-220ENST00000620789 C1orf53Q5VUE5 145 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 PPTC7Q8NI37 304 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 CYP2W1Q8TAV3 490 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 MLXIPQ9HAP2 919 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 MYH7BA7E2Y1 1941 aa20.84■□□□□ 0.93
LITAF-220ENST00000620789 SORBS3O60504 671 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 KPNA6O60684 536 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 MYL3P08590 195 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 ZNF76P36508 570 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 TRIM29Q14134 588 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 METTL7BQ6UX53 244 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 NIPA1Q7RTP0 329 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 GIMAP8Q8ND71 665 aaPredicted RBP20.83■□□□□ 0.93
LITAF-220ENST00000620789 VTI1AQ96AJ9 217 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 SPATA33Q96N06 139 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 KCNH7Q9NS40 1196 aa20.83■□□□□ 0.93
LITAF-220ENST00000620789 A0A0U1RQG5 324 aaPredicted RBP20.82■□□□□ 0.92
LITAF-220ENST00000620789 FAM86B1E9PN63 330 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 MEIS1O00470 390 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 ATP9AO75110 1047 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 FAM86B2P0C5J1 330 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 KCNA2P16389 499 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 RTP1P59025 263 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 HSDL1Q3SXM5 330 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 CYFIP1Q7L576 1253 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 KRT25Q7Z3Z0 450 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 TBCKQ8TEA7 893 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 MTG1Q9BT17 334 aaPredicted RBP20.82■□□□□ 0.92
LITAF-220ENST00000620789 BCAS3Q9H6U6 928 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 BRMS1Q9HCU9 246 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 ATP11BQ9Y2G3 1177 aa20.82■□□□□ 0.92
LITAF-220ENST00000620789 IGLV3-22A0A075B6J6 115 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 MMP1P03956 469 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 CIITAP33076 1130 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 KRT2P35908 639 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 USP11P51784 963 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 FOSBP53539 338 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 NONOQ15233 471 aaKnown RBP eCLIP20.81■□□□□ 0.92
LITAF-220ENST00000620789 DGKDQ16760 1214 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 TRIM60Q495X7 471 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 KRT40Q6A162 431 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 C7orf61Q8IZ16 206 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 FAM184AQ8NB25 1140 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 OXER1Q8TDS5 423 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 NR2E3Q9Y5X4 410 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 DOCK5Q9H7D0 1870 aa20.81■□□□□ 0.92
LITAF-220ENST00000620789 EDIL3O43854 480 aa20.8■□□□□ 0.92
LITAF-220ENST00000620789 ARP10275 920 aa20.8■□□□□ 0.92
LITAF-220ENST00000620789 HOXD8P13378 290 aaPredicted RBP20.8■□□□□ 0.92
LITAF-220ENST00000620789 PLA2G4DQ86XP0 818 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms