RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 RPUSD2Q8IZ73 545 aaKnown RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 GABPB2Q8TAK5 448 aaPredicted RBP9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ST7Q9NRC1 585 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 ADAMTS13Q76LX8 1427 aa9.11□□□□□ -0.95
ALMS1-208ENST00000620466 MEIS1O00470 390 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CLNS1AP54105 237 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 KCNQ4P56696 695 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 NNTQ13423 1086 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 DIXDC1Q155Q3 683 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 FAM178BQ8IXR5 827 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 GSPT2Q8IYD1 628 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CTIFO43310 598 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 PPIP5K2O43314 1243 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 LMNB1P20700 586 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 KIF22Q14807 665 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 METTL13Q8N6R0 699 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 PRPF31Q8WWY3 499 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 TEKT3Q9BXF9 490 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 AP5Z1O43299 807 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 N4BP1O75113 896 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 HSPA1LP34931 641 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 PDE6BP35913 854 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 IRX5P78411 483 aaPredicted RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 SATB1Q01826 763 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 HHATQ5VTY9 493 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 EFCAB13Q8IY85 973 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 RIOK1Q9BRS2 568 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 THRAP3Q9Y2W1 955 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 RIPOR2Q9Y4F9 1068 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CLIC2O15247 247 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CDK8P49336 464 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 FKBP3Q00688 224 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 PPP2R5EQ16537 467 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 ZNF710Q8N1W2 664 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 GSDMBQ8TAX9 411 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 PAGR1Q9BTK6 254 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CACYBPQ9HB71 228 aaKnown RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 PDE6CP51160 858 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CCDC110Q8TBZ0 833 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 GPR101Q96P66 508 aaPredicted RBP9.1□□□□□ -0.95
ALMS1-208ENST00000620466 FUCA2Q9BTY2 467 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 TTLL3Q9Y4R7 772 aa9.1□□□□□ -0.95
ALMS1-208ENST00000620466 CYP19A1P11511 503 aaPredicted RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 P4HA1P13674 534 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 HACE1Q8IYU2 909 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 IGDCC4Q8TDY8 1250 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 STMN2Q93045 179 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 VPS37BQ9H9H4 285 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 FAM114A2Q9NRY5 505 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 HDAC6Q9UBN7 1215 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 ADAM21Q9UKJ8 722 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PLA2G4BP0C869 781 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 STX2P32856 288 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PSMC2P35998 433 aaKnown RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 ALS2CLQ60I27 953 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 EP400NLQ6ZTU2 488 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 GRK7Q8WTQ7 553 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 MLXIPQ9HAP2 919 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 EMILIN3Q9NT22 766 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 BAIAP2L1Q9UHR4 511 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 ZNF131P52739 623 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 LRRC63Q05C16 580 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 DLGAP5Q15398 846 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 OTUD6AQ7L8S5 288 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 VSIG1Q86XK7 387 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 CCDC13Q8IYE1 715 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 STK38LQ9Y2H1 464 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PTPN22Q9Y2R2 807 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PGRMC1O00264 195 aaKnown RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PPEF1O14829 653 aaPredicted RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 TADA3O75528 432 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 KRT15P19012 456 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 ADCY8P40145 1251 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 SARNPP82979 210 aaKnown RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 GKAP1Q5VSY0 366 aaPredicted RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PBKQ96KB5 322 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PLA2G12BQ9BX93 195 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 SLC5A4Q9NY91 659 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 CSADQ9Y600 493 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 PP2D1A8MPX8 630 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 GFPT2O94808 682 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 TRIM37O94972 964 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 GCFC2P16383 781 aaKnown RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 FAM47CQ5HY64 1035 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 GPATCH4Q5T3I0 446 aaKnown RBP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 CASC4Q6P4E1 433 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 BRINP3Q76B58 766 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 DGKHQ86XP1 1220 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 SENP2Q9HC62 589 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.09□□□□□ -0.95
ALMS1-208ENST00000620466 RNF14Q9UBS8 474 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 TRPC6Q9Y210 931 aa9.09□□□□□ -0.95
ALMS1-208ENST00000620466 GGCXP38435 758 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 KCNJ6P48051 423 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 SEPT2Q15019 361 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 DCUN1D2Q6PH85 259 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 NLRX1Q86UT6 975 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 ENGASEQ8NFI3 743 aa9.09□□□□□ -0.96
ALMS1-208ENST00000620466 MTA3Q9BTC8 594 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms