RNA–Protein interactions for RNA: ENST00000619831.4

DMD-229, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-229ENST00000619831 ATXN7L3BQ96GX2 97 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 NUDCD1Q96RS6 583 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 BCAP29Q9UHQ4 241 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 TRAPPC8Q9Y2L5 1435 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 ARHGEF40Q8TER5 1519 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 ABCA9Q8IUA7 1624 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 RAD17O75943 681 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 SUN1O94901 812 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 SNRPA1P09661 255 aaKnown RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 NUMBP49757 651 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 EPHB1P54762 984 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 UBE3AQ05086 875 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 DMPKQ09013 629 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 CYTH1Q15438 398 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 SRRM1Q8IYB3 904 aaKnown RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 TUBGCP2Q9BSJ2 902 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 VCX3AQ9NNX9 186 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 PHF8Q9UPP1 1060 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 KIAA0556O60303 1618 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 DKC1O60832 514 aaKnown RBP eCLIP4.79□□□□□ -1.64
DMD-229ENST00000619831 CTCFP49711 727 aaPredicted RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 ATL3Q6DD88 541 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 TTC17Q96AE7 1141 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 TGS1Q96RS0 853 aaKnown RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 MXD3Q9BW11 206 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 C19orf44Q9H6X5 657 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 RBM12Q9NTZ6 932 aaKnown RBP4.79□□□□□ -1.64
DMD-229ENST00000619831 ABCF3Q9NUQ8 709 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 PARP3Q9Y6F1 533 aa4.79□□□□□ -1.64
DMD-229ENST00000619831 SMNDC1O75940 238 aaKnown RBP eCLIP4.78□□□□□ -1.64
DMD-229ENST00000619831 IL15P40933 162 aaPredicted RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 GYG1P46976 350 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 EPHB4P54760 987 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CORO7P57737 925 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CUL4AQ13619 759 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 PALM2Q8IXS6 379 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CCDC124Q96CT7 223 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 NPHS2Q9NP85 383 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 NOP53Q9NZM5 478 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 ANAPC5Q9UJX4 755 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 USP32Q8NFA0 1604 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 ZBED4O75132 1171 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 DEXIO95424 95 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 MUM1L1Q5H9M0 696 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 PDXDC1Q6P996 788 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 KLF6Q99612 283 aaPredicted RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 TRIM33Q9UPN9 1127 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 DNAJC8O75937 253 aaPredicted RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 SLC4A1P02730 911 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 SERPINB4P48594 390 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 TMEM87AQ8NBN3 555 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 FAM135BQ49AJ0 1406 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 ZCCHC18P0CG32 403 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 USP14P54578 494 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 GABPAQ06546 454 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 ERMNQ8TAM6 284 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CCDC127Q96BQ5 260 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 DYNLL2Q96FJ2 89 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 PPARGC1AQ9UBK2 798 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 DBNLQ9UJU6 430 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 LRRC53A6NM62 1247 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 DAPK3O43293 454 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 SLC1A4P43007 532 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 PRKG1Q13976 671 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 LLPHQ9BRT6 129 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 TMEM260Q9NX78 707 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 NIP7Q9Y221 180 aaKnown RBP eCLIP4.78□□□□□ -1.64
DMD-229ENST00000619831 SMCO2A6NFE2 343 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CHUKO15111 745 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 ACTN1P12814 892 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 DDIT3P35638 169 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 KIF11P52732 1056 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 TRIM14Q14142 442 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 LONRF1Q17RB8 773 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CCDC93Q567U6 631 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 SYNE4Q8N205 404 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 MB21D1Q8N884 522 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 KIFC2Q96AC6 838 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 HPS4Q9NQG7 708 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 PLEKP08567 350 aaPredicted RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 FCER1AP12319 257 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 GYS1P13807 737 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 STAT3P40763 770 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 DR1Q01658 176 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 PRR16Q569H4 304 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 RESP18Q5W5W9 173 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 SMIM5Q71RC9 77 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 KIAA0825Q8IV33 1275 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 SULF1Q8IWU6 871 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 LRRC27Q9C0I9 530 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 RNPEPQ9H4A4 650 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 CNNM2Q9H8M5 875 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 GINM1Q9NU53 330 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 FNDC3AQ9Y2H6 1198 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 XPO1O14980 1071 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 SH3BP5O60239 455 aa4.78□□□□□ -1.64
DMD-229ENST00000619831 EEF1B2P24534 225 aaKnown RBP4.78□□□□□ -1.64
DMD-229ENST00000619831 FAM102BQ5T8I3 360 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms