RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 EEPD1Q7L9B9 569 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 ANKRD33Q7Z3H0 272 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 FBXO16Q8IX29 292 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 GIMAP8Q8ND71 665 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 KLHDC9Q8NEP7 349 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 CRYGNQ8WXF5 182 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 TNPO1Q92973 898 aaKnown RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 EMID1Q96A84 441 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 TRIM44Q96DX7 344 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 CDHR1Q96JP9 859 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 ZSCAN31Q96LW9 406 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 GLT1D1Q96MS3 346 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 RMDN3Q96TC7 470 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 PDCD2LQ9BRP1 358 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 ZMYND12Q9H0C1 365 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 AP5M1Q9H0R1 490 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 BCAS3Q9H6U6 928 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 PSTPIP2Q9H939 334 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 SH2B1Q9NRF2 756 aaPredicted RBP6□□□□□ -1.45
SHMT1-211ENST00000618902 PCDH10Q9P2E7 1040 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 TELO2Q9Y4R8 837 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 CUL9Q8IWT3 2517 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 TRANK1O15050 2925 aa6□□□□□ -1.45
SHMT1-211ENST00000618902 UNC80Q8N2C7 3258 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 WNT7AO00755 349 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 ADAMTS4O75173 837 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 LETM1O95202 739 aaPredicted RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 FOSP01100 380 aaPredicted RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 RPLP2P05387 115 aaKnown RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 NR3C2P08235 984 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 SUPT20HL2P0C7V6 817 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 XRCC6P12956 609 aaKnown RBP eCLIP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PRKCSHP14314 528 aaPredicted RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 SMPD1P17405 629 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 ADCYAP1R1P41586 468 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 ADCY7P51828 1080 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 GUCY1B3Q02153 619 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 TNFAIP2Q03169 654 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PTPN11Q06124 597 aaPredicted RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PDE4DQ08499 809 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 CCDC173Q0VFZ6 552 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 TTLL4Q14679 1199 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PGM5Q15124 567 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 STXBP2Q15833 593 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 CCDC144BQ3MJ40 725 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 GNPTABQ3T906 1256 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 DUSP28Q4G0W2 176 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 CCDC62Q6P9F0 684 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 SLC39A5Q6ZMH5 540 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 VSIG10LQ86VR7 867 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 CYP2W1Q8TAV3 490 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 CCDC12Q8WUD4 166 aaPredicted RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 COPS5Q92905 334 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 CUL5Q93034 780 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 TNFRSF25Q93038 417 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 LLPHQ9BRT6 129 aaKnown RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 ALG1Q9BT22 464 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PHF20Q9BVI0 1012 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 ANO3Q9BYT9 981 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 EHMT1Q9H9B1 1298 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 GRPEL1Q9HAV7 217 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 POLR3EQ9NVU0 708 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 ZHX1Q9UKY1 873 aaPredicted RBP5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PCDHA6Q9UN73 950 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 PCDHA8Q9Y5H6 950 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 MYH7BA7E2Y1 1941 aa5.99□□□□□ -1.45
SHMT1-211ENST00000618902 VCANP13611 3396 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SPTBN5Q9NRC6 3674 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 KIAA1217Q5T5P2 1943 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 A6NJR5 290 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 DCDC2CA8MYV0 355 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 KIF28PB7ZC32 967 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 TLR3O15455 904 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 CDKL5O76039 1030 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 MBD3O95983 291 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 MYCLP12524 364 aaPredicted RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 ITGB5P18084 799 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 NCLP19338 710 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 ACLYP53396 1101 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 ZNF445P59923 1031 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 AKAP17AQ02040 695 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SP2Q02086 613 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 NR5A1Q13285 461 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 LRIT3Q3SXY7 679 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 GNASQ5JWF2 1037 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 ARHGEF16Q5VV41 709 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 KRT40Q6A162 431 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 CCSAPQ6IQ19 270 aaPredicted RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 CPLX2Q6PUV4 134 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SEPT14Q6ZU15 432 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 TRIM22Q8IYM9 498 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SLC43A3Q8NBI5 491 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 DAGLBQ8NCG7 672 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 DIS3LQ8TF46 1054 aaKnown RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SYAP1Q96A49 352 aaPredicted RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 UIMC1Q96RL1 719 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 LBHD1Q9BQE6 289 aaPredicted RBP5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SENP7Q9BQF6 1050 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 KATNAL1Q9BW62 490 aa5.98□□□□□ -1.45
SHMT1-211ENST00000618902 SENP6Q9GZR1 1112 aaPredicted RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms