RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 NRAPQ86VF7 1730 aa22.54■■□□□ 1.2
NEK3-208ENST00000618534 EIF3HO15372 352 aaKnown RBP eCLIP22.53■■□□□ 1.2
NEK3-208ENST00000618534 TLR2O60603 784 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 HSF2BPO75031 334 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 ALS2CLQ60I27 953 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 EFCAB13Q8IY85 973 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 RNF10Q8N5U6 811 aaKnown RBP22.53■■□□□ 1.2
NEK3-208ENST00000618534 RUFY1Q96T51 708 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 EDEM3Q9BZQ6 932 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 RBAK-RBAKDNI3L0D1 243 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 LDHCP07864 332 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 EPB41P11171 864 aaKnown RBP22.53■■□□□ 1.2
NEK3-208ENST00000618534 SMARCA1P28370 1054 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 DNA2P51530 1060 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 TMEM119Q4V9L6 283 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 KRT79Q5XKE5 535 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 TPTE2Q6XPS3 522 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 RIC8AQ9NPQ8 531 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 CNTNAP4Q9C0A0 1308 aa22.53■■□□□ 1.2
NEK3-208ENST00000618534 NOL4O94818 638 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 GLI1P08151 1106 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 ADCY7P51828 1080 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 ECM1Q16610 540 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 CFAP221Q4G0U5 840 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 ZCWPW2Q504Y3 356 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 TEX11Q8IYF3 940 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 MYOCDQ8IZQ8 938 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 BCAS4Q8TDM0 211 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 ZIM3Q96PE6 472 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 RAB34Q9BZG1 259 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 RIOX1Q9H6W3 641 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 COL4A3BPQ9Y5P4 624 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 SLC9C1Q4G0N8 1177 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 CCDC40Q4G0X9 1142 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 CEP72Q9P209 647 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 TSKSQ9UJT2 592 aa22.52■■□□□ 1.2
NEK3-208ENST00000618534 TNRC6CQ9HCJ0 1690 aaKnown RBP22.52■■□□□ 1.2
NEK3-208ENST00000618534 ZSCAN5CA6NGD5 496 aaPredicted RBP22.51■■□□□ 1.19
NEK3-208ENST00000618534 PALMO75781 387 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 APBA1Q02410 837 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 COASYQ13057 564 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 PSMD2Q13200 908 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 NFIXQ14938 502 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 FAM83BQ5T0W9 1011 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 SFMBT2Q5VUG0 894 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 PROM2Q8N271 834 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 LSM14BQ9BX40 385 aaKnown RBP22.51■■□□□ 1.19
NEK3-208ENST00000618534 ESYT3A0FGR9 886 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 RGL2O15211 777 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 FTCDO95954 541 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 CARSP49589 748 aaKnown RBP22.51■■□□□ 1.19
NEK3-208ENST00000618534 PDIA5Q14554 519 aa22.51■■□□□ 1.19
NEK3-208ENST00000618534 GLE1Q53GS7 698 aaKnown RBP22.51■■□□□ 1.19
NEK3-208ENST00000618534 TRAF5O00463 557 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 ZPR1O75312 459 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 SERPING1P05155 500 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 PDHBP11177 359 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 FKBP3Q00688 224 aaKnown RBP22.5■■□□□ 1.19
NEK3-208ENST00000618534 TADA2BQ86TJ2 420 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 DNAJC19Q96DA6 116 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 FGFBP2Q9BYJ0 223 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 NFU1Q9UMS0 254 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 ZNF831Q5JPB2 1677 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 EBAG9O00559 213 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 FAM153BP0C7A2 387 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 TNNI2P48788 182 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 POLR2FP61218 127 aaKnown RBP22.5■■□□□ 1.19
NEK3-208ENST00000618534 NNTQ13423 1086 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 FAM153CQ494X1 144 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 ZNF804AQ7Z570 1209 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 IFT20Q8IY31 132 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 SH2D3CQ8N5H7 860 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 GJA10Q969M2 543 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 GDF3Q9NR23 364 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 FAM153AQ9UHL3 310 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 LEMD3Q9Y2U8 911 aa22.5■■□□□ 1.19
NEK3-208ENST00000618534 SPATA31A5Q5VU36 1347 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 SPATA31A7Q8IWB4 1347 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 HEXIM1O94992 359 aaKnown RBP22.49■■□□□ 1.19
NEK3-208ENST00000618534 LRRC27Q9C0I9 530 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 KANSL2Q9H9L4 492 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 EPB41L5Q9HCM4 733 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 A0A087WUV0 522 aaPredicted RBP22.49■■□□□ 1.19
NEK3-208ENST00000618534 KRT14P02533 472 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 KLRC1P26715 233 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 SKOR1P84550 965 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 GUCY2DQ02846 1103 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 FOXR2Q6PJQ5 311 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 CCDC43Q96MW1 224 aaKnown RBP22.49■■□□□ 1.19
NEK3-208ENST00000618534 TBC1D7Q9P0N9 293 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 RNF14Q9UBS8 474 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 ATP6V0A2Q9Y487 856 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 FAM169AQ9Y6X4 670 aa22.49■■□□□ 1.19
NEK3-208ENST00000618534 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 hCG_1984214I3L0E3 225 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 CPP00450 1065 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 NAB2Q15742 525 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 UBE2SQ16763 222 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 FAM26FQ5R3K3 315 aa22.48■■□□□ 1.19
NEK3-208ENST00000618534 KCTD16Q68DU8 428 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms