RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 HNRNPRO43390 633 aaKnown RBP13.4□□□□□ -0.26
MATR3-227ENST00000618441 CEP104O60308 925 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 FAM163BP0C2L3 166 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 PAK1Q13153 545 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 DYNC1I2Q13409 638 aaKnown RBP13.4□□□□□ -0.26
MATR3-227ENST00000618441 UCMAQ8WVF2 138 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 OPTNQ96CV9 577 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 NLRC4Q9NPP4 1024 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 MRPS35P82673 323 aaKnown RBP13.4□□□□□ -0.26
MATR3-227ENST00000618441 CRELD2Q6UXH1 353 aaPredicted RBP13.4□□□□□ -0.26
MATR3-227ENST00000618441 CCNJLQ8IV13 435 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 LRRC45Q96CN5 670 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 SUCLG2Q96I99 432 aa13.4□□□□□ -0.26
MATR3-227ENST00000618441 L3MBTL3Q96JM7 780 aaPredicted RBP13.4□□□□□ -0.26
MATR3-227ENST00000618441 CFAP73A6NFT4 308 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 PPP6R2O75170 966 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 EAPPQ56P03 285 aaPredicted RBP13.39□□□□□ -0.27
MATR3-227ENST00000618441 PTF1AQ7RTS3 328 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 ARHGEF2Q92974 986 aaKnown RBP13.39□□□□□ -0.27
MATR3-227ENST00000618441 NDST4Q9H3R1 872 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 GDAQ9Y2T3 454 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 PCDHGA4Q9Y5G9 962 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 SPAG1Q07617 926 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 IFI16Q16666 785 aaKnown RBP13.39□□□□□ -0.27
MATR3-227ENST00000618441 KANK3Q6NY19 840 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 CACNA2D4Q7Z3S7 1137 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 GDAP1Q8TB36 358 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 WDR66Q8TBY9 1149 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
MATR3-227ENST00000618441 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
MATR3-227ENST00000618441 DRD4P21917 467 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 KCNA3P22001 575 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 MTHFD1LQ6UB35 978 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 KCNH5Q8NCM2 988 aa13.39□□□□□ -0.27
MATR3-227ENST00000618441 ALDH8A1Q9H2A2 487 aaPredicted RBP13.39□□□□□ -0.27
MATR3-227ENST00000618441 RAD51CO43502 376 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 DTX3LQ8TDB6 740 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 KDM4FA0A1W2PPD8 638 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 KCNK3O14649 394 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 FLOT1O75955 427 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 HSPD1P10809 573 aaKnown RBP13.38□□□□□ -0.27
MATR3-227ENST00000618441 GSTT1P30711 240 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 DNAJC9Q8WXX5 260 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 WDR35Q9P2L0 1181 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 PNPLA6Q8IY17 1366 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 NPHP3-ACAD11A0A0J9YXS1 232 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 TNNC1P63316 161 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 TRIM14Q14142 442 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 ZNF174Q15697 407 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 CCDC25Q86WR0 208 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 CTNNBL1Q8WYA6 563 aaPredicted RBP13.38□□□□□ -0.27
MATR3-227ENST00000618441 IP6K1Q92551 441 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 IQCGQ9H095 443 aaKnown RBP13.38□□□□□ -0.27
MATR3-227ENST00000618441 GOLPH3Q9H4A6 298 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 FER1L4A9Z1Z3 1794 aa13.38□□□□□ -0.27
MATR3-227ENST00000618441 COL3A1P02461 1466 aaPredicted RBP13.38□□□□□ -0.27
MATR3-227ENST00000618441 SP100P23497 879 aaPredicted RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 CCNFP41002 786 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 USP46P62068 366 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 TIMM10P62072 90 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 DPYDQ12882 1025 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 C1orf131Q8NDD1 294 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 CAVIN3Q969G5 261 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 CDK5RAP3Q96JB5 506 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 MPHOSPH6Q99547 160 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 VCX3BQ9H321 246 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 ADAM22Q9P0K1 906 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 NKX1-2Q9UD57 310 aaPredicted RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 SETDB1Q15047 1291 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 FGFR1OP2Q9NVK5 253 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 ANO9A1A5B4 782 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 A6NHS1 94 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 RRM1P23921 792 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 BYSLQ13895 437 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 PTPAQ15257 358 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 UBE3BQ7Z3V4 1068 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 DDX47Q9H0S4 455 aaKnown RBP13.37□□□□□ -0.27
MATR3-227ENST00000618441 PCDHA13Q9Y5I0 950 aa13.37□□□□□ -0.27
MATR3-227ENST00000618441 F8W031 263 aaPredicted RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 RGS16O15492 202 aaPredicted RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 ORC4O43929 436 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 EIF4A3P38919 411 aaKnown RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 PSMC4P43686 418 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 ANKIB1Q9P2G1 1089 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 C3P01024 1663 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 ZNF213O14771 459 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 DAPK3O43293 454 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms