RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 RBSNQ9H1K0 784 aa18.89■□□□□ 0.61
TRAPPC3-210ENST00000617904 SERTAD1Q9UHV2 236 aa18.89■□□□□ 0.61
TRAPPC3-210ENST00000617904 PCDHA12Q9UN75 941 aa18.89■□□□□ 0.61
TRAPPC3-210ENST00000617904 KDM3AQ9Y4C1 1321 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 BECN2A8MW95 431 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 ADAMTS3O15072 1205 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 COPB2P35606 906 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 FLT3LGP49771 235 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 UBXN2AP68543 259 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 SETQ01105 290 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 Q4G0T1 1027 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 POTEDQ86YR6 584 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 SLAIN1Q8ND83 568 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 EPSTI1Q96J88 318 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 RNF208Q9H0X6 261 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 RAVER2Q9HCJ3 691 aaKnown RBP18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 RMND1Q9NWS8 449 aa18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 COLQQ9Y215 455 aaPredicted RBP18.88■□□□□ 0.61
TRAPPC3-210ENST00000617904 SMTNL1A8MU46 457 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 H0YGN5 161 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 ATP2A1O14983 1001 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 ADCY3O60266 1144 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 TDP2O95551 362 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 XRCC6P12956 609 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 CIITAP33076 1130 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 TECP42680 631 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 ZNF165P49910 485 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 NLRP12P59046 1061 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 GRIN1Q05586 938 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 ANO6Q4KMQ2 910 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 RNF214Q8ND24 703 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 SMCR8Q8TEV9 937 aaPredicted RBP18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 MTMR9Q96QG7 549 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 TEX13BQ9BXU2 312 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 NT5C3AQ9H0P0 336 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 TMEM60Q9H2L4 133 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 FBXO40Q9UH90 709 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 MRVI1Q9Y6F6 885 aa18.87■□□□□ 0.61
TRAPPC3-210ENST00000617904 WNT7AO00755 349 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 HOXA13P31271 388 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 HSD17B4P51659 736 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 GHRHRQ02643 423 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 CCDC173Q0VFZ6 552 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 CT47A1Q5JQC4 288 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 HAUS3Q68CZ6 603 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 XRRA1Q6P2D8 792 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 KCTD17Q8N5Z5 321 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 GTF3C2Q8WUA4 911 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 ATG4CQ96DT6 458 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 AGBL1Q96MI9 1066 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 MBOAT7Q96N66 472 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 TRERF1Q96PN7 1200 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 PANK2Q9BZ23 570 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 UNC93B1Q9H1C4 597 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 TTC12Q9H892 705 aaPredicted RBP18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 DISC1Q9NRI5 854 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 TCEAL9Q9UHQ7 104 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 TUBE1Q9UJT0 475 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 LOC285556D6RIA3 1793 aa18.86■□□□□ 0.61
TRAPPC3-210ENST00000617904 TNPO2O14787 897 aaKnown RBP18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 FXR1P51114 621 aaKnown RBP eCLIP18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 IRF5Q13568 498 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 RNF207Q6ZRF8 634 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 ANKRD13CQ8N6S4 541 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 IGSF22Q8N9C0 903 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 PXYLP1Q8TE99 480 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 STK17AQ9UEE5 414 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 PNMA3Q9UL41 463 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 DOCK3Q8IZD9 2030 aa18.85■□□□□ 0.61
TRAPPC3-210ENST00000617904 B4DLN1 442 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 ELNP15502 786 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 HOXA7P31268 230 aaPredicted RBP18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 FAM110CQ1W6H9 321 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 PRR16Q569H4 304 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 SNRNP48Q6IEG0 339 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 CHST13Q8NET6 341 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 U2AF1L4Q8WU68 220 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 MPHOSPH6Q99547 160 aaKnown RBP18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 RNF146Q9NTX7 359 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 ADAMTS5Q9UNA0 930 aa18.84■□□□□ 0.61
TRAPPC3-210ENST00000617904 ZNF536O15090 1300 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 GTPBP6O43824 516 aaPredicted RBP18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 SLC37A4O43826 429 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 SGPL1O95470 568 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 INHAP05111 366 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 STAT3P40763 770 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 PLS1Q14651 629 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 NIPA1Q7RTP0 329 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 MLKLQ8NB16 471 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 BPIFA3Q9BQP9 254 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 DNAJC25Q9H1X3 360 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 ACAD9Q9H845 621 aa18.83■□□□□ 0.61
TRAPPC3-210ENST00000617904 OPLAHO14841 1288 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 PNOCQ13519 176 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 IL17AQ16552 155 aa18.82■□□□□ 0.6
TRAPPC3-210ENST00000617904 NSMFQ6X4W1 530 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms