RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 NUGGCQ68CJ6 796 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 KRT39Q6A163 491 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 FAM129AQ9BZQ8 928 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 MID2Q9UJV3 735 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 ERVV-2B6SEH9 535 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 M0R2C6 588 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 SLC7A5Q01650 507 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 TFAP4Q01664 338 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 BFSP1Q12934 665 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 SGO2Q562F6 1265 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 ANKRD13CQ8N6S4 541 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 MRRFQ96E11 262 aaKnown RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 DISC1Q9NRI5 854 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.13□□□□□ -0.635e-7■■■□□ 16.5
CUL4A-212ENST00000617546 DONSONQ9NYP3 566 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 SNX12Q9UMY4 172 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 PLA2R1Q13018 1463 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 BEND6Q5SZJ8 279 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 FGD4Q96M96 766 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 ECT2Q9H8V3 914 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 CROCC2H7BZ55 1655 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 IQSEC2Q5JU85 1478 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 FTCDO95954 541 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 IRAK1P51617 712 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 BIRC2Q13490 618 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 PDE1CQ14123 709 aaPredicted RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 FAM89AQ96GI7 184 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 CCT8L2Q96SF2 557 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.13□□□□□ -0.633e-6■■□□□ 14.1
CUL4A-212ENST00000617546 YIPF3Q9GZM5 350 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 MRPL40Q9NQ50 206 aaKnown RBP11.13□□□□□ -0.63
CUL4A-212ENST00000617546 CD2APQ9Y5K6 639 aa11.13□□□□□ -0.63
CUL4A-212ENST00000617546 PVALEFA0A1B0GWK0 134 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 FAM107AO95990 144 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 PMS2P54278 862 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 CTSWP56202 376 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-212ENST00000617546 PPP1R12AO14974 1030 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-212ENST00000617546 CRCPO75575 148 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 FOSP01100 380 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-212ENST00000617546 CHRNA3P32297 505 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 MSH2P43246 934 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 MAGOHP61326 146 aaKnown RBP11.12□□□□□ -0.63
CUL4A-212ENST00000617546 MYL7Q01449 175 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 ZBTB38Q8NAP3 1195 aaPredicted RBP11.12□□□□□ -0.63
CUL4A-212ENST00000617546 SPATA4Q8NEY3 305 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 FUT8Q9BYC5 575 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 TRIM55Q9BYV6 548 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 PPCSQ9HAB8 311 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.633e-8■■■□□ 17.7
CUL4A-212ENST00000617546 MADDQ8WXG6 1647 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 POLR2BP30876 1174 aaKnown RBP11.12□□□□□ -0.63
CUL4A-212ENST00000617546 KCNB1Q14721 858 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 EPSTI1Q96J88 318 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 SENP1Q9P0U3 644 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 NDUFB9Q9Y6M9 179 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 IQANK1A0A1B0GTG1 560 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 NRBF2Q96F24 287 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 SLC24A3Q9HC58 644 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 TBC1D7Q9P0N9 293 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 USTQ9Y2C2 406 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 ARL2BPQ9Y2Y0 163 aa11.12□□□□□ -0.63
CUL4A-212ENST00000617546 TTI1O43156 1089 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PSMD7P51665 324 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 SLC8A3P57103 927 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 AP2B1P63010 937 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 KDM7AQ6ZMT4 941 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 FUCA2Q9BTY2 467 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 ACTN3Q08043 901 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 ALCAMQ13740 583 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 NR1I3Q14994 352 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 CSRNP1Q96S65 589 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 DDX25Q9UHL0 483 aaKnown RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 SPECC1L-ADORA2AF8WAN1 911 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 MYO1FO00160 1098 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PALMO75781 387 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 TTC4O95801 387 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 TMED2Q15363 201 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 CCDC92Q53HC0 331 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 UNC13DQ70J99 1090 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PODNQ7Z5L7 613 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 IFT122Q9HBG6 1241 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 GPCPD1Q9NPB8 672 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PFDN4Q9NQP4 134 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 C1orf112Q9NSG2 853 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 DTNBO60941 627 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 NR2F2P24468 414 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 CXCR5P32302 372 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 CENPUQ71F23 418 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 CATSPER1Q8NEC5 780 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 LRGUKQ96M69 825 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 MRPL47Q9HD33 250 aaKnown RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 ST7Q9NRC1 585 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PNMA2Q9UL42 364 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms