RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 PYCARDQ9ULZ3 195 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 PPP1R12BO60237 982 aaPredicted RBP23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 RHOBTB3O94955 611 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 PTGS1P23219 599 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 PRCPP42785 496 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 RPS6P62753 249 aaKnown RBP23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 COG2Q14746 738 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 TREML2Q5T2D2 321 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 DRC7Q8IY82 874 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 TRERF1Q96PN7 1200 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 RMND1Q9NWS8 449 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 CTNND2Q9UQB3 1225 aa23.1■■□□□ 1.29
CNTNAP3B-212ENST00000617422 EML1O00423 815 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 TMEM132BQ14DG7 1078 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 CEP55Q53EZ4 464 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 SV2BQ7L1I2 683 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 ZC3H15Q8WU90 426 aaKnown RBP23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 ELP3Q9H9T3 547 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 TMOD4Q9NZQ9 345 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 KIAA1024Q9UPX6 916 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 SYNRGQ9UMZ2 1314 aa23.09■■□□□ 1.29
CNTNAP3B-212ENST00000617422 E9PMD0 336 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 SPATA31C1P0DKV0 1188 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 ARP10275 920 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 TPM4P67936 248 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 EAPPQ56P03 285 aaPredicted RBP23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 NCAPH2Q6IBW4 605 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 CCDC186Q7Z3E2 898 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 HPS3Q969F9 1004 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 SCN4AP35499 1836 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 SPDYE16A6NNV3 312 aaPredicted RBP23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 MEIS1O00470 390 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 PEX10O60683 326 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 ITGB5P18084 799 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 ASIC1P78348 528 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 CATSPER3Q86XQ3 398 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 MCF2L2Q86YR7 1114 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 TAAR1Q96RJ0 339 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 CSADQ9Y600 493 aa23.08■■□□□ 1.29
CNTNAP3B-212ENST00000617422 POTEFA5A3E0 1075 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 CT47A1Q5JQC4 288 aaPredicted RBP23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 POTEGQ6S5H5 508 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 GIMAP8Q8ND71 665 aaPredicted RBP23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 CCDC94Q9BW85 323 aaPredicted RBP23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 RNF146Q9NTX7 359 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 INTS13Q9NVM9 706 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 CTDP1Q9Y5B0 961 aaPredicted RBP23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 IRF6O14896 467 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 PSMD10O75832 226 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 FDX1P10109 184 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 FCER1AP12319 257 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 PTPN21Q16825 1174 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 SNRNP48Q6IEG0 339 aaKnown RBP23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 DYMQ7RTS9 669 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 SLC5A5Q92911 643 aa23.07■■□□□ 1.28
CNTNAP3B-212ENST00000617422 IREB2P48200 963 aaKnown RBP23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 PSMC6P62333 389 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 MRPS9P82933 396 aaKnown RBP23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 STK4Q13043 487 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 ARID5BQ14865 1188 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 SPATA1Q5VX52 437 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 OTOP1Q7RTM1 612 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 ADSSL1Q8N142 457 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 PMS1P54277 932 aaKnown RBP23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 RBM46Q8TBY0 533 aaKnown RBP23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 OTUD5Q96G74 571 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 EHMT1Q9H9B1 1298 aa23.06■■□□□ 1.28
CNTNAP3B-212ENST00000617422 FRMPD4Q14CM0 1322 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 ZC3H4Q9UPT8 1303 aaKnown RBP23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 KDM3AQ9Y4C1 1321 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 AMPD3Q01432 767 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 PDE4DQ08499 809 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 NSMFQ6X4W1 530 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 NELFBQ8WX92 580 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 MXRA8Q9BRK3 442 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 LOC285556D6RIA3 1793 aa23.05■■□□□ 1.28
CNTNAP3B-212ENST00000617422 LRCH2Q5VUJ6 765 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 RNF207Q6ZRF8 634 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 APTXQ7Z2E3 356 aaKnown RBP23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 DDX12PQ92771 950 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 DNAJC19Q96DA6 116 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 NT5C3AQ9H0P0 336 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 RWDD2AQ9UIY3 292 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 TRIM49BA6NDI0 452 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 SERPINC1P01008 464 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 EIF2AK2P19525 551 aaKnown RBP23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 RPA1P27694 616 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 UBASH3AP57075 661 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 CYP4A11Q02928 519 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 LRMPQ12912 555 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 PAK1Q13153 545 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 BAATQ14032 418 aaPredicted RBP23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 CDKAL1Q5VV42 579 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 KIAA0895Q8NCT3 520 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 WDR11Q9BZH6 1224 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 RGL1Q9NZL6 768 aa23.04■■□□□ 1.28
CNTNAP3B-212ENST00000617422 GRIN3BO60391 1043 aa23.03■■□□□ 1.28
CNTNAP3B-212ENST00000617422 OAZ1P54368 228 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms