RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 SPRY4Q9C004 299 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF700Q9H0M5 742 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 TNKS2Q9H2K2 1166 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 KCNF1Q9H3M0 494 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 CNTD2Q9H8S5 307 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 RSAD1Q9HA92 442 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 CWC22Q9HCG8 908 aaKnown RBP-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 POLMQ9NP87 494 aaPredicted RBP-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 SNRKQ9NRH2 765 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 CYTL1Q9NRR1 136 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF586Q9NXT0 402 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 GTSE1Q9NYZ3 720 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 EPS15L1Q9UBC2 864 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 RBPJLQ9UBG7 517 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 SUFUQ9UMX1 484 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAPK8IP1Q9UQF2 711 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 DLGAP4Q9Y2H0 992 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 HS3ST3B1Q9Y662 390 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 TNRQ92752 1358 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 PTCH1Q13635 1447 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 F8P00451 2351 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 GCN1Q92616 2671 aaKnown RBP-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 LAMA3Q16787 3333 aa-0.76□□□□□ -2.53
SOX2-OT-236ENST00000616401 WDR17Q8IZU2 1322 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FAM170BA6NMN3 283 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 COLCA2A8K830 154 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 C22orf46C9J442 243 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 TNFRSF10CO14798 259 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FAM189A1O60320 539 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 LDB3O75112 727 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 DEAF1O75398 565 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MATN4O95460 622 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ADH1AP07327 375 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 NR3C2P08235 984 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 THRBP10828 461 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FGF3P11487 239 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 TYRP1P17643 537 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 GUCY2CP25092 1073 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ADMP35318 185 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SOX18P35713 384 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 CD96P40200 585 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAP2K4P45985 399 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 HTR6P50406 440 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 DGKQP52824 942 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 EPHB3P54753 998 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 JAM2P57087 298 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SLC8A3P57103 927 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 IRX3P78415 501 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAP3K9P80192 1104 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SRSF3P84103 164 aaKnown RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FOXK1P85037 733 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PMP22Q01453 160 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 CHRNEQ04844 493 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAP3K12Q12852 859 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SNW1Q13573 536 aaKnown RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PEX6Q13608 980 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 KLF9Q13886 244 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ETFDHQ16134 617 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MTX3Q5HYI7 312 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF484Q5JVG2 852 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 HECTD2Q5U5R9 776 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SLFN13Q68D06 897 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PMS2CLQ68D20 193 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PPP4R3AQ6IN85 833 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZCCHC12Q6PEW1 402 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FIGNL1Q6PIW4 674 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PAOXQ6QHF9 649 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ADGRD2Q7Z7M1 963 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FAM124AQ86V42 546 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 CDC20BQ86Y33 519 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SPATA2LQ8IUW3 424 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 LIX1LQ8IVB5 337 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 IGDCC3Q8IVU1 814 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 GPR135Q8IZ08 494 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 AGGF1Q8N302 714 aaeCLIP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 LINC00304Q8N9R0 145 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PJA1Q8NG27 643 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PXYLP1Q8TE99 480 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 DENND1AQ8TEH3 1009 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SSC4DQ8WTU2 575 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ZNF296Q8WUU4 475 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MYLIPQ8WY64 445 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 TTC9Q92623 222 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 DLG3Q92796 817 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 TRIM63Q969Q1 353 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 LENG9Q96B70 501 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PRR11Q96HE9 360 aaPredicted RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 INTS4Q96HW7 963 aaKnown RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ADOQ96SZ5 270 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 LARP6Q9BRS8 491 aaKnown RBP-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 CCSER1Q9C0I3 900 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 BHMT2Q9H2M3 363 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 MAGEE1Q9HCI5 957 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 LRRC4CQ9HCJ2 640 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PRDM7Q9NQW5 492 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SEMA4GQ9NTN9 838 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 SIRT5Q9NXA8 310 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 FLRT1Q9NZU1 646 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 PAK5Q9P286 719 aa-0.77□□□□□ -2.53
SOX2-OT-236ENST00000616401 ANKIB1Q9P2G1 1089 aa-0.77□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms