RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 TMCO3Q6UWJ1 677 aa16.4■□□□□ 0.22
CDKN1A-208ENST00000615513 CCDC65Q8IXS2 484 aa16.4■□□□□ 0.22
CDKN1A-208ENST00000615513 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
CDKN1A-208ENST00000615513 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
CDKN1A-208ENST00000615513 EIF3CLB5ME19 914 aaKnown RBP16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 ATP8B1O43520 1251 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 ZRANB2O95218 330 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 BMP3P12645 472 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 ZCWPW2Q504Y3 356 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 FAM26FQ5R3K3 315 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 EIF3CQ99613 913 aaKnown RBP16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 PANK4Q9NVE7 773 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 ZNF219Q9P2Y4 722 aaPredicted RBP16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 GH2P01242 217 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 PLA2G4BP0C869 781 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 SREBF1P36956 1147 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 KLK7P49862 253 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 CHMP4BP1P59074 171 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 TRAF1Q13077 416 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 WHAMMP3Q1A5X7 153 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 TEX35Q5T0J7 233 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 EHBP1Q8NDI1 1231 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 ETNPPLQ8TBG4 499 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 GJA10Q969M2 543 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 PRMT6Q96LA8 375 aaPredicted RBP16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 PITPNM2Q9BZ72 1349 aa16.39■□□□□ 0.21
CDKN1A-208ENST00000615513 ARFGEF1Q9Y6D6 1849 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 SPDYE3A6NKU9 549 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 PSMD14O00487 310 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 IPO7O95373 1038 aaKnown RBP16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 ABL1P00519 1130 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 HERVK_113P62684 666 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 FKBP3Q00688 224 aaKnown RBP16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 GABPB1Q06547 395 aaPredicted RBP16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 FAM20AQ96MK3 541 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 CSRNP1Q96S65 589 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 PLAGL2Q9UPG8 496 aa16.38■□□□□ 0.21
CDKN1A-208ENST00000615513 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 KRT86O43790 486 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 CIITAP33076 1130 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 SPIRE1Q08AE8 756 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 IKQ13123 557 aaPredicted RBP16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 ERMNQ8TAM6 284 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 CEP63Q96MT8 703 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 EDEM3Q9BZQ6 932 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 TMOD2Q9NZR1 351 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 POTEB3A0JP26 581 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 FRMD3A2A2Y4 597 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 POTECB2RU33 542 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 E9PMD0 336 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 POTEB2H3BUK9 544 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 SLC15A2Q16348 729 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 POTEBQ6S5H4 581 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 GUCA1BQ9UMX6 200 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 PCDHA2Q9Y5H9 948 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 FHOD1Q9Y613 1164 aa16.37■□□□□ 0.21
CDKN1A-208ENST00000615513 TNS1Q9HBL0 1735 aaKnown RBP16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 PIK3CDO00329 1044 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 NKRFO15226 690 aaKnown RBP eCLIP16.36■□□□□ 0.213e-7■■■□□ 18.5
CDKN1A-208ENST00000615513 GNA14O95837 355 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 CYP11B2P19099 503 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 JAG1P78504 1218 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 AMPD2Q01433 879 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 LRRC41Q15345 812 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 CCDC122Q5T0U0 273 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 GPBP1Q86WP2 473 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 KCTD17Q8N5Z5 321 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 LENG9Q96B70 501 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 P2RX7Q99572 595 aaKnown RBP16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 COL4A3BPQ9Y5P4 624 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 MED24O75448 989 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 CYP3A4P08684 503 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 RPA1P27694 616 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 SLC12A3P55017 1021 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 MARSP56192 900 aaKnown RBP16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 PRR16Q569H4 304 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 KIAA1328Q86T90 577 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 GLIS3Q8NEA6 775 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.36■□□□□ 0.212e-6■■□□□ 11.7
CDKN1A-208ENST00000615513 ARHGEF10LQ9HCE6 1279 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
CDKN1A-208ENST00000615513 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 PNMA6AP0CW24 399 aaPredicted RBP16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 RRP1BQ14684 758 aaKnown RBP16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 USH1GQ495M9 461 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 RSBN1LQ6PCB5 846 aaPredicted RBP16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 JAKMIP2Q96AA8 810 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 PARD6BQ9BYG5 372 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 TSGA10Q9BZW7 698 aa16.35■□□□□ 0.21
CDKN1A-208ENST00000615513 RXRBP28702 533 aa16.34■□□□□ 0.21
CDKN1A-208ENST00000615513 STAT2P52630 851 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms