RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 H2AFXP16104 143 aaPredicted RBP3.37□□□□□ -1.87
CBWD3-209ENST00000614377 MCM3P25205 808 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 APBA1Q02410 837 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 CTDSPL2Q05D32 466 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 DMPKQ09013 629 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 GPS2Q13227 327 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 LRRC41Q15345 812 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 SWI5Q1ZZU3 235 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 GFOD2Q3B7J2 385 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 LRRC23Q53EV4 343 aaPredicted RBP3.37□□□□□ -1.87
CBWD3-209ENST00000614377 ZMYM1Q5SVZ6 1142 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 PCNX4Q63HM2 1172 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 NEPROQ6NW34 567 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 GRAMD2AQ8IUY3 354 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 TCEAL8Q8IYN2 117 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 CCDC170Q8IYT3 715 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 LRRC43Q8N309 656 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 SPERTQ8NA61 448 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 TNIP2Q8NFZ5 429 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM58Q8NG06 486 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 LRRN4Q8WUT4 740 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.37□□□□□ -1.87
CBWD3-209ENST00000614377 GIMAP5Q96F15 307 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 GJD4Q96KN9 370 aaPredicted RBP3.37□□□□□ -1.87
CBWD3-209ENST00000614377 TSGA13Q96PP4 275 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 SEMA6BQ9H3T3 888 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 ZWILCHQ9H900 591 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 KIAA1586Q9HCI6 787 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 DISC1Q9NRI5 854 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 AASDHPPTQ9NRN7 309 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 AIPL1Q9NZN9 384 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 VTI1BQ9UEU0 232 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 PPP1R9AQ9ULJ8 1098 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 CARD8Q9Y2G2 431 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 IPPQ9Y573 584 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.37□□□□□ -1.87
CBWD3-209ENST00000614377 RRBP1Q9P2E9 1410 aaKnown RBP3.37□□□□□ -1.87
CBWD3-209ENST00000614377 KDM2BQ8NHM5 1336 aa3.37□□□□□ -1.87
CBWD3-209ENST00000614377 SYNJ2BP-COX16A0A087WUM0 186 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 LIN7AO14910 233 aaPredicted RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CASQ2O14958 399 aaPredicted RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 ZBTB39O15060 712 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CHUKO15111 745 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 MUSKO15146 869 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 ALDH2P05091 517 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 ALAS1P13196 640 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 DESP17661 470 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 HOXD12P35452 270 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 FNTAP49354 379 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TPM4P67936 248 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 ST5P78524 1137 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 POU4F2Q12837 409 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TCIRG1Q13488 830 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 STIM1Q13586 685 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 LRP8Q14114 963 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CRY1Q16526 586 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 WDR44Q5JSH3 913 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 GALNT17Q6IS24 598 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 LVRNQ6Q4G3 990 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CEP68Q76N32 757 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 RSRC2Q7L4I2 434 aaKnown RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 DGLUCYQ7Z3D6 616 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 SIX5Q8N196 739 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 GBP7Q8N8V2 638 aaPredicted RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 FAM200AQ8TCP9 573 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 NUP133Q8WUM0 1156 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 LZICQ8WZA0 190 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CFAP36Q96G28 342 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 EPSTI1Q96J88 318 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 RBM14Q96PK6 669 aaKnown RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CGREF1Q99674 301 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 B3GNT4Q9C0J1 378 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 SNTG2Q9NY99 539 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 EFR3BQ9Y2G0 817 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 ZMYM3Q14202 1370 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 AATKQ6ZMQ8 1374 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 ATXN2Q99700 1313 aaKnown RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM64A6NGJ6 449 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TRIM64BA6NI03 449 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 RASSF10A6NK89 507 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 C1QTNF9BB2RNN3 333 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 INO80B-WBP1J3KQ70 363 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TOR1BO14657 336 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 PLSCR1O15162 318 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 PLOD3O60568 738 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 SCG2P13521 617 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TNFAIP3P21580 790 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 CTCFP49711 727 aaPredicted RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 RAC1P63000 192 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 KCNB1Q14721 858 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 NR6A1Q15406 480 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 NAA16Q6N069 864 aaPredicted RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 BICDL1Q6ZP65 573 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 C1orf229Q6ZS94 237 aaPredicted RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 INTS8Q75QN2 995 aaKnown RBP3.36□□□□□ -1.87
CBWD3-209ENST00000614377 TAOK1Q7L7X3 1001 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 BRAPQ7Z569 592 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 JAMLQ86YT9 394 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 GALNT15Q8N3T1 639 aa3.36□□□□□ -1.87
CBWD3-209ENST00000614377 MSANTD4Q8NCY6 345 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms