RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 N4BP3O15049 544 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
CNOT3-208ENST00000613073 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 PDE4DQ08499 809 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 GRB10Q13322 594 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 NCAPH2Q6IBW4 605 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 VEZTQ9HBM0 779 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 C10orf71Q711Q0 1435 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 RGPD3A6NKT7 1758 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-208ENST00000613073 RGPD4Q7Z3J3 1758 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 A0A087WUV0 522 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-208ENST00000613073 CTAGE15A4D2H0 777 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 KCNJ18B7U540 433 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 RHOBTB3O94955 611 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 CTAGE8P0CG41 777 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 KCNA3P22001 575 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 RBL2Q08999 1139 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 KCNJ12Q14500 433 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 KCNB1Q14721 858 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 CTAGE6Q86UF2 777 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 CTAGE4Q8IX94 777 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 CDK5RAP3Q96JB5 506 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 TMOD2Q9NZR1 351 aa18.3■□□□□ 0.52
CNOT3-208ENST00000613073 POTEB2H3BUK9 544 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 ZMYND10O75800 440 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 FCER1AP12319 257 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 ECE1P42892 770 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 DLGAP5Q15398 846 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 TCP11X2Q5H9J9 407 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 CDAN1Q8IWY9 1227 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 SUGP1Q8IWZ8 645 aaKnown RBP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 HINFPQ9BQA5 517 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 CUEDC2Q9H467 287 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 SCAF8Q9UPN6 1271 aaKnown RBP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 ADGRG1Q9Y653 693 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 MYH7BA7E2Y1 1941 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 MAP2K2P36507 400 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 FXR2P51116 673 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 STK4Q13043 487 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 ORC2Q13416 577 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 DYMQ7RTS9 669 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 RTKN2Q8IZC4 609 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 OGFOD1Q8N543 542 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 GIMAP8Q8ND71 665 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 ACRBPQ8NEB7 543 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 ANKRD20A12PQ8NF67 263 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 PNMA5Q96PV4 448 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 EXOC1Q9NV70 894 aa18.29■□□□□ 0.52
CNOT3-208ENST00000613073 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-208ENST00000613073 CTAGE9A4FU28 777 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 MYL1P05976 194 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 SF3B2Q13435 895 aaKnown RBP18.28■□□□□ 0.52
CNOT3-208ENST00000613073 PPFIBP1Q86W92 1011 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 GSPT2Q8IYD1 628 aaKnown RBP18.28■□□□□ 0.52
CNOT3-208ENST00000613073 HAS1Q92839 578 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 ATRNL1Q5VV63 1379 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 AKR1B15C9JRZ8 316 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-208ENST00000613073 PES1O00541 588 aaKnown RBP18.28■□□□□ 0.52
CNOT3-208ENST00000613073 PPP4R3AQ6IN85 833 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 FAM212AQ96EL1 285 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 TRIM47Q96LD4 638 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 BLOC1S4Q9NUP1 217 aa18.28■□□□□ 0.52
CNOT3-208ENST00000613073 ZNF70Q9UC06 446 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-208ENST00000613073 COL4A5P29400 1685 aa18.27■□□□□ 0.52
CNOT3-208ENST00000613073 SYF2O95926 243 aaKnown RBP18.27■□□□□ 0.52
CNOT3-208ENST00000613073 PBX1P40424 430 aa18.27■□□□□ 0.52
CNOT3-208ENST00000613073 COPB1P53618 953 aaKnown RBP18.27■□□□□ 0.52
CNOT3-208ENST00000613073 STIM1Q13586 685 aa18.27■□□□□ 0.52
CNOT3-208ENST00000613073 TTC19Q6DKK2 380 aaPredicted RBP18.27■□□□□ 0.52
CNOT3-208ENST00000613073 SV2BQ7L1I2 683 aa18.27■□□□□ 0.52
CNOT3-208ENST00000613073 IRF2BP1Q8IU81 584 aa18.27■□□□□ 0.52
CNOT3-208ENST00000613073 RAB34Q9BZG1 259 aa18.27■□□□□ 0.52
CNOT3-208ENST00000613073 LIMA1Q9UHB6 759 aaKnown RBP18.27■□□□□ 0.52
CNOT3-208ENST00000613073 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
CNOT3-208ENST00000613073 PSMA7O14818 248 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 CCDC172P0C7W6 258 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 ECM1Q16610 540 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 KRT79Q5XKE5 535 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 SAMD1Q6SPF0 538 aaPredicted RBP18.27■□□□□ 0.51
CNOT3-208ENST00000613073 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 KCNK18Q7Z418 384 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 C7orf25Q9BPX7 421 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 ACBD3Q9H3P7 528 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 MAGEF1Q9HAY2 307 aa18.27■□□□□ 0.51
CNOT3-208ENST00000613073 VIL1P09327 827 aaKnown RBP18.26■□□□□ 0.51
CNOT3-208ENST00000613073 BMP3P12645 472 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 CASP14P31944 242 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 AMPD3Q01432 767 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 LARP4BQ92615 738 aaKnown RBP18.26■□□□□ 0.51
CNOT3-208ENST00000613073 P2RX7Q99572 595 aaKnown RBP18.26■□□□□ 0.51
CNOT3-208ENST00000613073 ANO3Q9BYT9 981 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 SLC39A2Q9NP94 309 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 HDAC9Q9UKV0 1011 aa18.26■□□□□ 0.51
CNOT3-208ENST00000613073 PCDHA12Q9UN75 941 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms