RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
FAM3A-221ENST00000612856 YY1AP1Q9H869 796 aa11.95□□□□□ -0.5
FAM3A-221ENST00000612856 ABCB11O95342 1321 aa11.95□□□□□ -0.5
FAM3A-221ENST00000612856 A0A087WUV0 522 aaPredicted RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 CCDC151A5D8V7 595 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 RPSAP08865 295 aaKnown RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 DLATP10515 647 aaKnown RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 RASA1P20936 1047 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 CASP8Q14790 479 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 BRD3Q15059 726 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 SHROOM1Q2M3G4 852 aaPredicted RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 ANKRD13CQ8N6S4 541 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 IFT74Q96LB3 600 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 AGBL1Q96MI9 1066 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 L2HGDHQ9H9P8 463 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 TAB2Q9NYJ8 693 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 TNPO2O14787 897 aaKnown RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 MYL5Q02045 173 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 CCL15Q16663 113 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 RNF26Q9BY78 433 aaPredicted RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 MTMR4Q9NYA4 1195 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 GOLGA6CA6NDK9 693 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 TMEM110-MUSTN1A8MSY1 372 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 GOLGA6DP0CG33 693 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 TGFB2P61812 414 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 IFRD2Q12894 506 aaPredicted RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 MAP9Q49MG5 647 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 NLRC4Q9NPP4 1024 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 GOLGA6AQ9NYA3 693 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 NFE2L3Q9Y4A8 694 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 ATP8B1O43520 1251 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 LIFRP42702 1097 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 ATP1A2P50993 1020 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 CLNS1AP54105 237 aaKnown RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 SARNPP82979 210 aaKnown RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 KIF23Q02241 960 aaPredicted RBP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 E2F5Q15329 346 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 SARM1Q6SZW1 724 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 TMTC3Q6ZXV5 915 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 UPF1Q92900 1129 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■□□ 18.4
FAM3A-221ENST00000612856 JAKMIP2Q96AA8 810 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 SLF1Q9BQI6 1058 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.94□□□□□ -0.5
FAM3A-221ENST00000612856 FUT8Q9BYC5 575 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 AKT3Q9Y243 479 aa11.94□□□□□ -0.5
FAM3A-221ENST00000612856 ASTN2O75129 1339 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PHLPP2Q6ZVD8 1323 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 RGL2O15211 777 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 TDP2O95551 362 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 MRPS25P82663 173 aaKnown RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 NLRP4Q96MN2 994 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PEX10O60683 326 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 TFRCP02786 760 aaKnown RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 TM4SF1P30408 202 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 SMTNP53814 917 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 POLGP54098 1239 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 BAATQ14032 418 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PDXDC2PQ6P474 469 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 LDHDQ86WU2 507 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PROCA1Q8NCQ7 364 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 JADE2Q9NQC1 790 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 RMND1Q9NWS8 449 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 ARFGEF2Q9Y6D5 1785 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PRRC2BQ5JSZ5 2229 aaKnown RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 ZRANB2O95218 330 aaKnown RBP eCLIP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 FGFR1OPO95684 399 aaKnown RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PPP2R5BQ15173 497 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 TOGARAM2Q6ZUX3 1019 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 FAM151AQ8WW52 585 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 N4BP2L2Q92802 583 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 IMPG2Q9BZV3 1241 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 PCIF1Q9H4Z3 704 aa11.93□□□□□ -0.5
FAM3A-221ENST00000612856 BCCIPQ9P287 314 aaKnown RBP eCLIP11.93□□□□□ -0.5
FAM3A-221ENST00000612856 GOLGA6L7A0A1B0GV03 622 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 KRT5P13647 590 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 TNNI1P19237 187 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 GNGT1P63211 74 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 ACTN3Q08043 901 aaPredicted RBP11.92□□□□□ -0.5
FAM3A-221ENST00000612856 TBC1D8BQ0IIM8 1120 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 ARHGAP44Q17R89 818 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 MCF2L2Q86YR7 1114 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 CDAN1Q8IWY9 1227 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 DPF2Q92785 391 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 WDR70Q9NW82 654 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 CLIC2O15247 247 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 CUTAO60888 179 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 BIRC2Q13490 618 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 POSTNQ15063 836 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 ODR4Q5SWX8 454 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms