RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SP7Q8TDD2 431 aaPredicted RBP20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 PABPC5Q96DU9 382 aaKnown RBP20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 UBA5Q9GZZ9 404 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 KCNH6Q9H252 994 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 ZNF318Q5VUA4 2279 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 COL4A6Q14031 1691 aa20.12■□□□□ 0.81
CSNK1E-215ENST00000612795 RSPH10B2B2RC85 870 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 HAS3O00219 553 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 RSPH10BP0C881 870 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 THPOP40225 353 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 GPM6BQ13491 265 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 TCEAL5Q5H9L2 206 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 MFSD6Q6ZSS7 791 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 FBXL18Q96ME1 805 aa20.11■□□□□ 0.81
CSNK1E-215ENST00000612795 MYO7AQ13402 2215 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 ZMYM6O95789 1325 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 H3BNC9 293 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 DHX16O60231 1041 aaKnown RBP20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 EIF3JO75822 258 aaKnown RBP20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 ZP2Q05996 745 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 EVI5LQ96CN4 794 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 NSUN3Q9H649 340 aaKnown RBP20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 CLDND1Q9NY35 253 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 PRKAG3Q9UGI9 489 aa20.1■□□□□ 0.81
CSNK1E-215ENST00000612795 DOCK5Q9H7D0 1870 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 KAT6AQ92794 2004 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 UPP2O95045 317 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 PCP11498 1178 aaKnown RBP20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 PLEKHG4Q58EX7 1191 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 SEPT8Q92599 483 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 ZKSCAN3Q9BRR0 538 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 PXMP2Q9NR77 195 aa20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 ZBTB47Q9UFB7 747 aaPredicted RBP20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 MRPL11Q9Y3B7 192 aaKnown RBP20.09■□□□□ 0.81
CSNK1E-215ENST00000612795 POTEB3A0JP26 581 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 SORBS3O60504 671 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 NR3C2P08235 984 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 MKRN4PQ13434 485 aaPredicted RBP20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 MCMDC2Q4G0Z9 681 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 POTEBQ6S5H4 581 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 SERINC5Q86VE9 423 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 FBXO11Q86XK2 927 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 ADHFE1Q8IWW8 467 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 TMEM192Q8IY95 271 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 ADGRF4Q8IZF3 695 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 PNMA1Q8ND90 353 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 ESR2Q92731 530 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 FAM227BQ96M60 508 aa20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 UPF3BQ9BZI7 483 aaKnown RBP20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 RNF41Q9H4P4 317 aaPredicted RBP20.08■□□□□ 0.81
CSNK1E-215ENST00000612795 A0A0D9SFI3 127 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 CFBP00751 764 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 HSPD1P10809 573 aaKnown RBP20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 HIC1Q14526 733 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 QRICH1Q2TAL8 776 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 TBC1D10CQ8IV04 446 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 ATP6V0A1Q93050 837 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 SPATA33Q96N06 139 aa20.07■□□□□ 0.8
CSNK1E-215ENST00000612795 NEDD4P46934 1319 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 CCDC171Q6TFL3 1326 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 C17orf102A2RUQ5 167 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 PPFIA4O75335 1185 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 GGPS1O95749 300 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 CTSHP09668 335 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 MYCLP12524 364 aaPredicted RBP20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 HOXD8P13378 290 aaPredicted RBP20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 ASPRV1Q53RT3 343 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 MYSM1Q5VVJ2 828 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 KCNV1Q6PIU1 500 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 HFE2Q6ZVN8 426 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 RPAINQ86UA6 219 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 TOP1MTQ969P6 601 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 IFIH1Q9BYX4 1025 aaKnown RBP20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 KAT14Q9H8E8 782 aa20.06■□□□□ 0.8
CSNK1E-215ENST00000612795 WDFY4Q6ZS81 3184 aa20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 C19orf67A6NJJ6 358 aa20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 CTNNB1P35222 781 aa20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 HSDL1Q3SXM5 330 aa20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 IQCA1Q86XH1 822 aa20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 DGKHQ86XP1 1220 aa20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 POP1Q99575 1024 aaKnown RBP20.05■□□□□ 0.8
CSNK1E-215ENST00000612795 SALL3Q9BXA9 1300 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 NCK2O43639 380 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 IRS1P35568 1242 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 COL19A1Q14993 1142 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 CLUL1Q15846 466 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 CCDC178Q5BJE1 867 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 CELF3Q5SZQ8 465 aaKnown RBP20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 ZNF589Q86UQ0 364 aaPredicted RBP20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 MFSD14AQ96MC6 490 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 VAT1LQ9HCJ6 419 aa20.04■□□□□ 0.8
CSNK1E-215ENST00000612795 PARP1P09874 1014 aaKnown RBP20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 FIBCD1Q8N539 461 aa20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 PDCD2LQ9BRP1 358 aa20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 C16orf70Q9BSU1 422 aa20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 MLXIPQ9HAP2 919 aa20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 KIAA1671Q9BY89 1806 aa20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 C5orf42Q9H799 3197 aa20.03■□□□□ 0.8
CSNK1E-215ENST00000612795 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms