RNA–Protein interactions for RNA: ENST00000612683.1

FDPS-221, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FDPS, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-221ENST00000612683 LRRC8DQ7L1W4 858 aa17.08■□□□□ 0.32
FDPS-221ENST00000612683 IL31RAQ8NI17 732 aa17.08■□□□□ 0.32
FDPS-221ENST00000612683 DHX38Q92620 1227 aaKnown RBP17.08■□□□□ 0.32
FDPS-221ENST00000612683 CERS4Q9HA82 394 aa17.08■□□□□ 0.32
FDPS-221ENST00000612683 RBM8AQ9Y5S9 174 aaKnown RBP17.08■□□□□ 0.32
FDPS-221ENST00000612683 HAS3O00219 553 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 RFXAPO00287 272 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 BAIAP3O94812 1187 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 PARNO95453 639 aaKnown RBP17.07■□□□□ 0.32
FDPS-221ENST00000612683 F2P00734 622 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 CKBP12277 381 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 ANTXR2P58335 489 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 ZNF200P98182 395 aaPredicted RBP17.07■□□□□ 0.32
FDPS-221ENST00000612683 GPNMBQ14956 572 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 HERC6Q8IVU3 1022 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 MICALL1Q8N3F8 863 aa17.07■□□□□ 0.32
FDPS-221ENST00000612683 ATXN2LQ8WWM7 1075 aaKnown RBP17.07■□□□□ 0.32
FDPS-221ENST00000612683 GPKOWQ92917 476 aaPredicted RBP eCLIP17.07■□□□□ 0.323e-6■□□□□ 10.1
FDPS-221ENST00000612683 PTK7Q13308 1070 aa17.06■□□□□ 0.32
FDPS-221ENST00000612683 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
FDPS-221ENST00000612683 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
FDPS-221ENST00000612683 CTCFLQ8NI51 663 aaPredicted RBP17.06■□□□□ 0.32
FDPS-221ENST00000612683 TSPYL2Q9H2G4 693 aaPredicted RBP17.06■□□□□ 0.32
FDPS-221ENST00000612683 RTEL1Q9NZ71 1219 aa17.06■□□□□ 0.32
FDPS-221ENST00000612683 THEGQ9P2T0 379 aa17.06■□□□□ 0.32
FDPS-221ENST00000612683 TLL1O43897 1013 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 HOXD8P13378 290 aaPredicted RBP17.05■□□□□ 0.32
FDPS-221ENST00000612683 UBA1P22314 1058 aaKnown RBP17.05■□□□□ 0.32
FDPS-221ENST00000612683 KIF5BP33176 963 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
FDPS-221ENST00000612683 RBL2Q08999 1139 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 CNKSR3Q6P9H4 555 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 ZNF654Q8IZM8 581 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 RRP36Q96EU6 259 aaKnown RBP17.05■□□□□ 0.32
FDPS-221ENST00000612683 ASB2Q96Q27 587 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 ZBED2Q9BTP6 218 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 BCAS3Q9H6U6 928 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 LY9Q9HBG7 655 aa17.05■□□□□ 0.32
FDPS-221ENST00000612683 PRC1O43663 620 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 GTPBP6O43824 516 aaPredicted RBP17.04■□□□□ 0.32
FDPS-221ENST00000612683 NBNO60934 754 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 WDR5P61964 334 aaKnown RBP17.04■□□□□ 0.32
FDPS-221ENST00000612683 TAP1Q03518 808 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 ZNF618Q5T7W0 954 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 TMTC2Q8N394 836 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 SMARCC2Q8TAQ2 1214 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 ARNTL2Q8WYA1 636 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 CUL5Q93034 780 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 MAP3K14Q99558 947 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 C16orf70Q9BSU1 422 aa17.04■□□□□ 0.32
FDPS-221ENST00000612683 TANC1Q9C0D5 1861 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 ABHD14A-ACY1A0A1B0GW23 586 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 H3BRB1 525 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 NOP56O00567 594 aaKnown RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 STAM2O75886 525 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 DDAH1O94760 285 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 CXCL10P02778 98 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 SMARCA1P28370 1054 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 MCM5P33992 734 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 GNAQP50148 359 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 IKBKEQ14164 716 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 HIC1Q14526 733 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 SKIV2LQ15477 1246 aaKnown RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 TRIM71Q2Q1W2 868 aaKnown RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 TMCO2Q7Z6W1 182 aaPredicted RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 IL27Q8NEV9 243 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 WNT8BQ93098 351 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 SPZ1Q9BXG8 430 aa17.03■□□□□ 0.32
FDPS-221ENST00000612683 TUT1Q9H6E5 874 aaKnown RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 SEC63Q9UGP8 760 aaKnown RBP17.03■□□□□ 0.32
FDPS-221ENST00000612683 CHD9Q3L8U1 2897 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 C17orf102A2RUQ5 167 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 EPOPA6NHQ4 379 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 SPATA31C2B4DYI2 1134 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 ARHGEF15O94989 841 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 ICAM3P32942 547 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 DEFB103AP81534 67 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 NEDD9Q14511 834 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 TCTN1Q2MV58 587 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 ATP6V0A1Q93050 837 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 TMEM87BQ96K49 555 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 INPP4AQ96PE3 977 aaPredicted RBP17.02■□□□□ 0.32
FDPS-221ENST00000612683 MTA3Q9BTC8 594 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 USP26Q9BXU7 913 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 LSG1Q9H089 658 aaKnown RBP17.02■□□□□ 0.32
FDPS-221ENST00000612683 MTCH2Q9Y6C9 303 aa17.02■□□□□ 0.32
FDPS-221ENST00000612683 LGALS2P05162 132 aa17.01■□□□□ 0.31
FDPS-221ENST00000612683 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
FDPS-221ENST00000612683 THPOP40225 353 aa17.01■□□□□ 0.31
FDPS-221ENST00000612683 CMTR1Q8N1G2 835 aaKnown RBP17.01■□□□□ 0.31
FDPS-221ENST00000612683 SRBD1Q8N5C6 995 aaKnown RBP17.01■□□□□ 0.31
FDPS-221ENST00000612683 RNPEPQ9H4A4 650 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms