RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 PVALEFA0A1B0GWK0 134 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 LRRIQ4A6NIV6 560 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 FAM196BA6NMK8 535 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L15C9J2P7 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L13C9JLJ4 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L11C9JVI0 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L18D6R9N7 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L22D6RA61 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L17D6RBQ6 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L19D6RCP7 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L20D6RJB6 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 HNRNPDLO14979 420 aaKnown RBP9.4□□□□□ -0.91
TMCO1-208ENST00000612311 SORBS3O60504 671 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 STAMBPO95630 424 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 PDE6CP51160 858 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 CLCN6P51797 869 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 GPSM2P81274 684 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L24Q0WX57 530 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 UAP1Q16222 522 aaPredicted RBP9.4□□□□□ -0.91
TMCO1-208ENST00000612311 BRDTQ58F21 947 aaPredicted RBP9.4□□□□□ -0.91
TMCO1-208ENST00000612311 NAA35Q5VZE5 725 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 DENND2CQ68D51 928 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 FBXO38Q6PIJ6 1188 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L6PQ6QN14 398 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 ZBTB8OSQ8IWT0 167 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 FAM204AQ9H8W3 233 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 RIMBP3CA6NJZ7 1639 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 RIMBP3BA6NNM3 1639 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 RIMBP3Q9UFD9 1639 aa9.4□□□□□ -0.91
TMCO1-208ENST00000612311 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TEX33O43247 280 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 GRM1Q13255 1194 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TTC31Q49AM3 519 aaPredicted RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 MIGA2Q7L4E1 593 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 FAM160B2Q86V87 743 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 FAM71BQ8TC56 605 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 MRRFQ96E11 262 aaKnown RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 CABS1Q96KC9 395 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TDRD3Q9H7E2 651 aaKnown RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 SUGCTQ9HAC7 445 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ZMYND10O75800 440 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 PRPF6O94906 941 aaKnown RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 POLGP54098 1239 aaPredicted RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 SNAP25P60880 206 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ITPK1Q13572 414 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TOGARAM2Q6ZUX3 1019 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TAOK1Q7L7X3 1001 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ZNF354CQ86Y25 554 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 DCAF4Q8WV16 495 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 NT5C1BQ96P26 610 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 KRT12Q99456 494 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TRIM6Q9C030 488 aaPredicted RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TMEM260Q9NX78 707 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 USP27XA6NNY8 438 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 MXRA7P84157 204 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ORC2Q13416 577 aaPredicted RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 SBK1Q52WX2 424 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 PPP4R3CPQ6ZMV5 832 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ABHD10Q9NUJ1 306 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ADAMTS1Q9UHI8 967 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 LRRN2O75325 713 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 MOCS3O95396 460 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 ALDH3A1P30838 453 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 INPP5BP32019 993 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 CXCR5P32302 372 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 CCDC6Q16204 474 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 TBC1D10BQ4KMP7 808 aaPredicted RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
TMCO1-208ENST00000612311 GCNT4Q9P109 453 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 FAM169AQ9Y6X4 670 aa9.39□□□□□ -0.91
TMCO1-208ENST00000612311 AFF2P51816 1311 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 ADGRB2O60241 1585 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 SERPING1P05155 500 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 SNX16P57768 344 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 YWHAEP62258 255 aaKnown RBP9.38□□□□□ -0.91
TMCO1-208ENST00000612311 ZNF772Q68DY9 489 aaPredicted RBP9.38□□□□□ -0.91
TMCO1-208ENST00000612311 IPO4Q8TEX9 1081 aaKnown RBP9.38□□□□□ -0.91
TMCO1-208ENST00000612311 DPF2Q92785 391 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 ACCSQ96QU6 501 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 PHF20Q9BVI0 1012 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 RNF14Q9UBS8 474 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 PCDHA6Q9UN73 950 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 PCDHA8Q9Y5H6 950 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 PCDHA13Q9Y5I0 950 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 RGS16O15492 202 aaPredicted RBP9.38□□□□□ -0.91
TMCO1-208ENST00000612311 GFPT2O94808 682 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 IFNB1P01574 187 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 ASNSP08243 561 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 VPS41P49754 854 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 GNGT1P63211 74 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 ARHGAP4P98171 946 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 CTTNQ14247 550 aaKnown RBP9.38□□□□□ -0.91
TMCO1-208ENST00000612311 MESDQ14696 234 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 USP49Q70CQ1 688 aa9.38□□□□□ -0.91
TMCO1-208ENST00000612311 CEP57Q86XR8 500 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms