RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 UBA7P41226 1012 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 ARHGAP25P42331 645 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 TRPC1P48995 793 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 ATP2B2Q01814 1243 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 LETM2Q2VYF4 491 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 IRF2BP1Q8IU81 584 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 UBA5Q9GZZ9 404 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 MKNK2Q9HBH9 465 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 ARPP21Q9UBL0 812 aaPredicted RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 RABL2BQ9UNT1 228 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 FAN1Q9Y2M0 1017 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 SHTN1A0MZ66 631 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 EIF3CLB5ME19 914 aaKnown RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 ZNF185O15231 689 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 GTPBP6O43824 516 aaPredicted RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 PECAM1P16284 738 aaPredicted RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 PSMC1P62191 440 aaKnown RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 PFKFB3Q16875 520 aaPredicted RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 KCTD19Q17RG1 926 aaPredicted RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 SBK1Q52WX2 424 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTAGE4Q8IX94 777 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 EIF3CQ99613 913 aaKnown RBP11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 NYXQ9GZU5 481 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 ANKRD2Q9GZV1 360 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 IL17RBQ9NRM6 502 aa11.85□□□□□ -0.51
PCDHGC3-202ENST00000611950 BMP15O95972 392 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 ATP1A1P05023 1023 aaKnown RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 FCER1AP12319 257 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 TRIM21P19474 475 aaKnown RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 TPP2P29144 1249 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 DNA2P51530 1060 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 SLC35G1Q2M3R5 365 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 NAALADL2Q58DX5 795 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 CCDC122Q5T0U0 273 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 CYP26C1Q6V0L0 522 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 RIN2Q8WYP3 895 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 MKRN1Q9UHC7 482 aaKnown RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 CCDC151A5D8V7 595 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 NDUFA10O95299 355 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 ZNF24P17028 368 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 PRPHP41219 470 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 MNAT1P51948 309 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 BEND6Q5SZJ8 279 aaPredicted RBP11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 DTHD1Q6ZMT9 781 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 KIAA1328Q86T90 577 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 SMC1BQ8NDV3 1235 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 TGFBRAP1Q8WUH2 860 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 RABEP2Q9H5N1 569 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 TMEM165Q9HC07 324 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 DISC1Q9NRI5 854 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 RWDD2AQ9UIY3 292 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
PCDHGC3-202ENST00000611950 FAM170AA1A519 330 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 RCCD1A6NED2 376 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 CYTH3O43739 400 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 PLEKP08567 350 aaPredicted RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 PYGBP11216 843 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 MATR3P43243 847 aaKnown RBP eCLIP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TMTC1Q8IUR5 882 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 CEP112Q8N8E3 955 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 SH3RF3Q8TEJ3 882 aaPredicted RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TAF4BQ92750 862 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 MYO6Q9UM54 1294 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TTF2Q9UNY4 1162 aaKnown RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 LUC7L2Q9Y383 392 aaKnown RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TSPY3P0CV98 308 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TSPY8P0CW00 308 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 EIF6P56537 245 aaKnown RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 CRYMQ14894 314 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TPTE2Q6XPS3 522 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 GJA10Q969M2 543 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 MMS19Q96T76 1030 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 NAA15Q9BXJ9 866 aaKnown RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 LACRTQ9GZZ8 138 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 RETREG1Q9H6L5 497 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 SMARCAL1Q9NZC9 954 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 ANKIB1Q9P2G1 1089 aa11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 LIMA1Q9UHB6 759 aaKnown RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 G3BP2Q9UN86 482 aaKnown RBP11.83□□□□□ -0.52
PCDHGC3-202ENST00000611950 CCNT1O60563 726 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 RTN2O75298 545 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 TECP42680 631 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 ASIC1P78348 528 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 PPARDQ03181 441 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 GPS2Q13227 327 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 C12orf60Q5U649 245 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 FOXR1Q6PIV2 292 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 LRRC31Q6UY01 552 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 CSGALNACT2Q8N6G5 542 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 C4orf32Q8N8J7 132 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms