RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 GPATCH4Q5T3I0 446 aaKnown RBP13.79□□□□□ -0.2
FDPS-220ENST00000611010 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
FDPS-220ENST00000611010 GPKOWQ92917 476 aaPredicted RBP eCLIP13.79□□□□□ -0.23e-6■□□□□ 10.1
FDPS-220ENST00000611010 TTC14Q96N46 770 aa13.79□□□□□ -0.2
FDPS-220ENST00000611010 RMDN3Q96TC7 470 aa13.79□□□□□ -0.2
FDPS-220ENST00000611010 MPHOSPH6Q99547 160 aaKnown RBP13.79□□□□□ -0.2
FDPS-220ENST00000611010 ZBED2Q9BTP6 218 aa13.79□□□□□ -0.2
FDPS-220ENST00000611010 PXMP2Q9NR77 195 aa13.79□□□□□ -0.2
FDPS-220ENST00000611010 ABCB11O95342 1321 aa13.79□□□□□ -0.2
FDPS-220ENST00000611010 BAZ2BQ9UIF8 2168 aaKnown RBP13.79□□□□□ -0.2
FDPS-220ENST00000611010 SORBS3O60504 671 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
FDPS-220ENST00000611010 HOXC8P31273 242 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 GHRHRQ02643 423 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 DGKDQ16760 1214 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 HSDL1Q3SXM5 330 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 PPTC7Q8NI37 304 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 NSUN6Q8TEA1 469 aaKnown RBP13.78□□□□□ -0.2
FDPS-220ENST00000611010 BCAS3Q9H6U6 928 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 JMJD4Q9H9V9 463 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 PNMA2Q9UL42 364 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
FDPS-220ENST00000611010 HSD17B4P51659 736 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 SP2Q02086 613 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 COL19A1Q14993 1142 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 STXBP2Q15833 593 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 MFSD6Q6ZSS7 791 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 SERINC5Q86VE9 423 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 GJD3Q8N144 294 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 C7orf31Q8N865 590 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.21
FDPS-220ENST00000611010 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 DBF4BQ8NFT6 615 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 NEK9Q8TD19 979 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 ANKS1AQ92625 1134 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 IWS1Q96ST2 819 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 C16orf70Q9BSU1 422 aa13.77□□□□□ -0.21
FDPS-220ENST00000611010 KMT2EQ8IZD2 1858 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.76□□□□□ -0.21
FDPS-220ENST00000611010 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 H3BQ06 376 aaPredicted RBP13.76□□□□□ -0.21
FDPS-220ENST00000611010 KDM4AO75164 1064 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 PARNO95453 639 aaKnown RBP13.76□□□□□ -0.21
FDPS-220ENST00000611010 NR3C2P08235 984 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 LINC00271P0C7V0 271 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 UBA1P22314 1058 aaKnown RBP13.76□□□□□ -0.21
FDPS-220ENST00000611010 PDE4AP27815 886 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 IKBKEQ14164 716 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 PLEKHG4Q58EX7 1191 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 ANKRD45Q5TZF3 282 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 MYSM1Q5VVJ2 828 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 PTCRAQ6ISU1 281 aaPredicted RBP13.76□□□□□ -0.21
FDPS-220ENST00000611010 DGKHQ86XP1 1220 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 STAG2Q8N3U4 1231 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 ZFP91Q96JP5 570 aaPredicted RBP13.76□□□□□ -0.21
FDPS-220ENST00000611010 PDCD2LQ9BRP1 358 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 TELO2Q9Y4R8 837 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
FDPS-220ENST00000611010 TECTAO75443 2155 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 PRR33A8MZF0 331 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 B4DLN1 442 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 B4E1Z4 1266 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 PCP11498 1178 aaKnown RBP13.75□□□□□ -0.21
FDPS-220ENST00000611010 MRPL12P52815 198 aaKnown RBP13.75□□□□□ -0.21
FDPS-220ENST00000611010 EPC2Q52LR7 807 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 ARHGEF16Q5VV41 709 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 MYOCDQ8IZQ8 938 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 MRPL38Q96DV4 380 aaKnown RBP13.75□□□□□ -0.21
FDPS-220ENST00000611010 KATNAL1Q9BW62 490 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 MAF1Q9H063 256 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 PLXNA4Q9HCM2 1894 aa13.75□□□□□ -0.21
FDPS-220ENST00000611010 EFCAB14O75071 495 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
FDPS-220ENST00000611010 GGPS1O95749 300 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 CFBP00751 764 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 IGHDP01880 384 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 ANP32AP39687 249 aaKnown RBP13.74□□□□□ -0.21
FDPS-220ENST00000611010 LAMC2Q13753 1193 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 PGM5Q15124 567 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 ASPRV1Q53RT3 343 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 TCEAL5Q5H9L2 206 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 CELF3Q5SZQ8 465 aaKnown RBP13.74□□□□□ -0.21
FDPS-220ENST00000611010 ALYREFQ86V81 257 aaKnown RBP13.74□□□□□ -0.21
FDPS-220ENST00000611010 FBXO11Q86XK2 927 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 ESR2Q92731 530 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 MTMR8Q96EF0 704 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 IL25Q9H293 177 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 INSL6Q9Y581 213 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 KAT6AQ92794 2004 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 USP34Q70CQ2 3546 aa13.74□□□□□ -0.21
FDPS-220ENST00000611010 EMSYQ7Z589 1322 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 TREHO43280 583 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 CTSHP09668 335 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 HOXA13P31271 388 aaPredicted RBP13.73□□□□□ -0.21
FDPS-220ENST00000611010 LTBRP36941 435 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 THPOP40225 353 aa13.73□□□□□ -0.21
FDPS-220ENST00000611010 CACNB1Q02641 598 aaPredicted RBP13.73□□□□□ -0.21
FDPS-220ENST00000611010 ZP2Q05996 745 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms