RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 PPP1R3GB7ZBB8 358 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 MED24O75448 989 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 CIITAP33076 1130 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 HSD17B4P51659 736 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 PSMC6P62333 389 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 MCTP2Q6DN12 878 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 SV2BQ7L1I2 683 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
TP53-219ENST00000610538 TRIML1Q8N9V2 468 aa13.81□□□□□ -0.2
TP53-219ENST00000610538 SYTL5Q8TDW5 730 aaPredicted RBP13.81□□□□□ -0.2
TP53-219ENST00000610538 LARP4BQ92615 738 aaKnown RBP13.81□□□□□ -0.2
TP53-219ENST00000610538 XPO4Q9C0E2 1151 aaKnown RBP13.81□□□□□ -0.2
TP53-219ENST00000610538 ZNF214Q9UL59 606 aaPredicted RBP13.81□□□□□ -0.2
TP53-219ENST00000610538 MYMKA6NI61 221 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 EML1O00423 815 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 SERPINC1P01008 464 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 FCER1AP12319 257 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 IDEP14735 1019 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 ITGB5P18084 799 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 CDK11BP21127 795 aaKnown RBP13.8□□□□□ -0.2
TP53-219ENST00000610538 PRCPP42785 496 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
TP53-219ENST00000610538 SPIRE1Q08AE8 756 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 FILIP1Q7Z7B0 1213 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 CATSPER3Q86XQ3 398 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 CTNND2Q9UQB3 1225 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
TP53-219ENST00000610538 IKBKBO14920 756 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 RRP9O43818 475 aaKnown RBP13.8□□□□□ -0.2
TP53-219ENST00000610538 KLRC4O43908 158 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 CYP3A4P08684 503 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 MOXD1Q6UVY6 613 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 MCF2L2Q86YR7 1114 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 ANKRD13AQ8IZ07 590 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 C12orf42Q96LP6 360 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 RMDN3Q96TC7 470 aa13.8□□□□□ -0.2
TP53-219ENST00000610538 IQCA1LA6NCM1 817 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 ZBTB39O15060 712 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 PTGS1P23219 599 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 TPM4P67936 248 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 FANCCQ00597 558 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 PDE4DQ08499 809 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 HSP90AA2PQ14568 343 aaPredicted RBP13.79□□□□□ -0.2
TP53-219ENST00000610538 LRCH2Q5VUJ6 765 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 CCDC186Q7Z3E2 898 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 RBM46Q8TBY0 533 aaKnown RBP13.79□□□□□ -0.2
TP53-219ENST00000610538 ZNF577Q9BSK1 485 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 RRAGCQ9HB90 399 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 HOXC10Q9NYD6 342 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 MRPS9P82933 396 aaKnown RBP13.79□□□□□ -0.2
TP53-219ENST00000610538 STK4Q13043 487 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 CCDC144BQ3MJ40 725 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 PLCD3Q8N3E9 789 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 REPS2Q8NFH8 660 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 RAD54LQ92698 747 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 DDX12PQ92771 950 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 OPTNQ96CV9 577 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 FAM20AQ96MK3 541 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 PAGR1Q9BTK6 254 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 SLC39A2Q9NP94 309 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.79□□□□□ -0.2
TP53-219ENST00000610538 DACH1Q9UI36 760 aa13.79□□□□□ -0.2
TP53-219ENST00000610538 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
TP53-219ENST00000610538 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 TPM2P07951 284 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 CTTNQ14247 550 aaKnown RBP13.78□□□□□ -0.2
TP53-219ENST00000610538 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
TP53-219ENST00000610538 SARM1Q6SZW1 724 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 R3HDMLQ9H3Y0 253 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 KCNH7Q9NS40 1196 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 VAV3Q9UKW4 847 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 IPO5O00410 1097 aaKnown RBP13.78□□□□□ -0.2
TP53-219ENST00000610538 GAS7O60861 476 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 SPATA31C1P0DKV0 1188 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 UBASH3AP57075 661 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 AMPD3Q01432 767 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 PABPC4Q13310 644 aaKnown RBP eCLIP13.78□□□□□ -0.2
TP53-219ENST00000610538 ARHGEF16Q5VV41 709 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 OTOP1Q7RTM1 612 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 ZSCAN30Q86W11 494 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 ERO1BQ86YB8 467 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 TPH2Q8IWU9 490 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 CUEDC2Q9H467 287 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 EHMT1Q9H9B1 1298 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 TBC1D7Q9P0N9 293 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 TESPA1A2RU30 521 aaPredicted RBP13.78□□□□□ -0.2
TP53-219ENST00000610538 SORBS3O60504 671 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 PMS1P54277 932 aaKnown RBP13.78□□□□□ -0.2
TP53-219ENST00000610538 ENOX1Q8TC92 643 aaKnown RBP13.78□□□□□ -0.2
TP53-219ENST00000610538 NELFBQ8WX92 580 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 MXRA8Q9BRK3 442 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 TEX13BQ9BXU2 312 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 ZHX3Q9H4I2 956 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 EXOC1Q9NV70 894 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 RMND1Q9NWS8 449 aa13.78□□□□□ -0.2
TP53-219ENST00000610538 ADAMTS5Q9UNA0 930 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms