RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TMEM145Q8NBT3 493 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 NUP43Q8NFH3 380 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 DUSP10Q9Y6W6 482 aa6.25□□□□□ -1.41
SMCHD1-213ENST00000609587 A0A1W2PQ27 194 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 A0A1W2PQ64 194 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 A0A1W2PQC6 194 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 A0A1W2PQD8 194 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 PPP1R12AO14974 1030 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 MSL3P1P0C860 447 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 FBLN1P23142 703 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 RBM10P98175 930 aaKnown RBP6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 CYP4F3Q08477 520 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 CBX2Q14781 532 aaPredicted RBP6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 PRSS53Q2L4Q9 553 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 GPRC5CQ9NQ84 441 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 SMPD4Q9NXE4 827 aa6.24□□□□□ -1.41
SMCHD1-213ENST00000609587 THBDP07204 575 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 PAMP19021 973 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 TKFCQ3LXA3 575 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 SLC35F1Q5T1Q4 408 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 KIAA0907Q7Z7F0 614 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 KREMEN2Q8NCW0 462 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 FRS2Q8WU20 508 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 C1orf159Q96HA4 380 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 SORCS2Q96PQ0 1159 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 FEZ1Q99689 392 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 SCAND2PQ9GZW5 306 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 SLKQ9H2G2 1235 aaPredicted RBP6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 PDLIM7Q9NR12 457 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 CLEC1BQ9P126 229 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
SMCHD1-213ENST00000609587 NPHP3-ACAD11A0A0J9YXS1 232 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 BLACEA4D250 179 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 C1QTNF3-AMACRE9PGA6 284 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 FSHBP01225 129 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 ITGB3P05106 788 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 PLS3P13797 630 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 USP53Q70EK8 1073 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 PPIL6Q8IXY8 311 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 NPLOC4Q8TAT6 608 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 FNIP1Q8TF40 1166 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 MMP19Q99542 508 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 MRPL4Q9BYD3 311 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 NCOA5Q9HCD5 579 aaKnown RBP6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 CD2APQ9Y5K6 639 aa6.22□□□□□ -1.41
SMCHD1-213ENST00000609587 SBNO2Q9Y2G9 1366 aa6.21□□□□□ -1.41
SMCHD1-213ENST00000609587 PLD2O14939 933 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 MEFVO15553 781 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 SRGAP3O43295 1099 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 PFKLP17858 780 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 CNR2P34972 360 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 HTRA3P83110 453 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 DLX2Q07687 328 aaPredicted RBP6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 NTRK3Q16288 839 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 C21orf62-AS1Q17RA5 79 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 TAF7LQ5H9L4 462 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 DENND5AQ6IQ26 1287 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 ZNF662Q6ZS27 426 aa6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.21□□□□□ -1.42
SMCHD1-213ENST00000609587 RAPGEF3O95398 923 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 CYBBP04839 570 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 C6orf222P0C671 652 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 GYS2P54840 703 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 GABREP78334 506 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 KCNAB2Q13303 367 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 NR1I3Q14994 352 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 FNDC3BQ53EP0 1204 aaKnown RBP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 ACBD5Q5T8D3 534 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 E4F1Q66K89 784 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 IQCEQ6IPM2 695 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 PAQR3Q6TCH7 311 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 SAPCD2Q86UD0 394 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 CPNE8Q86YQ8 564 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 ZNF526Q8TF50 670 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 RBM15Q96T37 977 aaKnown RBP eCLIP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 NDOR1Q9UHB4 597 aa6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 TMEFF2Q9UIK5 374 aaPredicted RBP6.2□□□□□ -1.42
SMCHD1-213ENST00000609587 C7orf72A4D263 438 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 SH3D21A4FU49 640 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 PPP1R11O60927 126 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 ZNF20P17024 532 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 LTBRP36941 435 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 PABPC4Q13310 644 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 TESK1Q15569 626 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 ZC3H14Q6PJT7 736 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 MAMDC2Q7Z304 686 aaPredicted RBP6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 DDX1Q92499 740 aaKnown RBP6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 DIO2Q92813 273 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 PTPRN2Q92932 1015 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 SFMBT1Q9UHJ3 866 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 HCFC2Q9Y5Z7 792 aa6.19□□□□□ -1.42
SMCHD1-213ENST00000609587 A0A1W2PQJ5 194 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 ANKRD62A6NC57 917 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 ARNTLO00327 626 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 NOBOXO60393 691 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 NPHS1O60500 1241 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 EFCAB14O75071 495 aa6.18□□□□□ -1.42
SMCHD1-213ENST00000609587 RFPL3O75679 317 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms