RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 SELENOSQ9BQE4 189 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 TRIM7Q9C029 511 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 RANBP17Q9H2T7 1088 aaKnown RBP13.77□□□□□ -0.21
CTCFL-218ENST00000608440 USH1CQ9Y6N9 552 aa13.77□□□□□ -0.21
CTCFL-218ENST00000608440 H0YGN5 161 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 MMEP08473 750 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 TCP1P17987 556 aaKnown RBP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 RXRAP19793 462 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 BIRC3Q13489 604 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 ERMARDQ5T6L9 678 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 CEP128Q6ZU80 1094 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 ZNF572Q7Z3I7 529 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 DDX42Q86XP3 938 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 SLC52A2Q9HAB3 445 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 DMAP1Q9NPF5 467 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 AGPAT5Q9NUQ2 364 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 C9orf78Q9NZ63 289 aaPredicted RBP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 PNMA3Q9UL41 463 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 NFS1Q9Y697 457 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 HNRNPRO43390 633 aaKnown RBP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 CYP11B2P19099 503 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 HSPA9P38646 679 aaKnown RBP13.76□□□□□ -0.21
CTCFL-218ENST00000608440 GJA8P48165 433 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 TCERG1LQ5VWI1 586 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 FAM47EQ6ZV65 393 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 KLHL7Q8IXQ5 586 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 FAM129AQ9BZQ8 928 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 PNMA2Q9UL42 364 aa13.76□□□□□ -0.21
CTCFL-218ENST00000608440 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 COL14A1Q05707 1796 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 KCNJ18B7U540 433 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 ABLIM1O14639 778 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 ACTN4O43707 911 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 CHN1P15882 459 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 GNAZP19086 355 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 IFNAR2P48551 515 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 KCNJ12Q14500 433 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 ITIH4Q14624 930 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 IMMTQ16891 758 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 RASIP1Q5U651 963 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 ZNF317Q96PQ6 595 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 DDX23Q9BUQ8 820 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 ADAMTS7Q9UKP4 1686 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PPP1R3GB7ZBB8 358 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 RPL13P26373 211 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 GBP1P32455 592 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PSMC4P43686 418 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PEX5P50542 639 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 HAND2P61296 217 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 INF2Q27J81 1249 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 CACNA2D4Q7Z3S7 1137 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PIGWQ7Z7B1 504 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 RNF168Q8IYW5 571 aaPredicted RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 NBPF15Q8N660 670 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 RETREG2Q8NC44 543 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PHKBQ93100 1093 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 VPS54Q9P1Q0 977 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 LIMA1Q9UHB6 759 aaKnown RBP13.75□□□□□ -0.21
CTCFL-218ENST00000608440 SCOCQ9UIL1 159 aa13.75□□□□□ -0.21
CTCFL-218ENST00000608440 PRAMEF22A3QJZ6 481 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 GFPT2O94808 682 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 COPS2P61201 443 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 MCL1Q07820 350 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 HLFQ16534 295 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 P3H1Q32P28 736 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 TCP11X2Q5H9J9 407 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 BICDL1Q6ZP65 573 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 PURBQ96QR8 312 aaKnown RBP13.74□□□□□ -0.21
CTCFL-218ENST00000608440 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 HPS5Q9UPZ3 1129 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 PLEKP08567 350 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-218ENST00000608440 ETS2P15036 469 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 RASSF7Q02833 373 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 CFAP221Q4G0U5 840 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 LRIG3Q6UXM1 1119 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
CTCFL-218ENST00000608440 DNAJC9Q8WXX5 260 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 ZNHIT6Q9NWK9 470 aaKnown RBP13.74□□□□□ -0.21
CTCFL-218ENST00000608440 SPATA7Q9P0W8 599 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 CHMP2BQ9UQN3 213 aa13.74□□□□□ -0.21
CTCFL-218ENST00000608440 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 UBE2Q2LH0YL09 131 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 ZNF263O14978 683 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SEMA3EO15041 775 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 CETN3O15182 167 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 ASAP2O43150 1006 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 RAD51CO43502 376 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 BUB1O43683 1085 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SUPT3HO75486 399 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SPATA31D3P0C874 917 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SESN3P58005 492 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 CBX3Q13185 183 aa13.73□□□□□ -0.21
CTCFL-218ENST00000608440 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms