RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 TSEN34Q9BSV6 310 aaKnown RBP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 PRDM5Q9NQX1 630 aaPredicted RBP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 STARD7Q9NQZ5 370 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 DYNC1LI2O43237 492 aaPredicted RBP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 PQBP1O60828 265 aaKnown RBP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 ARIH2O95376 493 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 CFBP00751 764 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 BMP8BP34820 402 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 ADD1P35611 737 aaKnown RBP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 NKX3-2P78367 333 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 NOLC1Q14978 699 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 CCDC73Q6ZRK6 1079 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 MTERF4Q7Z6M4 381 aaKnown RBP12.01□□□□□ -0.49
LINC01001-203ENST00000607448 CATIPQ7Z7H3 387 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 DNERQ8NFT8 737 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 COPS5Q92905 334 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 PNMA2Q9UL42 364 aa12.01□□□□□ -0.49
LINC01001-203ENST00000607448 COL6A3P12111 3177 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 SCN10AQ9Y5Y9 1956 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 EYSQ5T1H1 3165 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 RBM47A0AV96 593 aaKnown RBP12□□□□□ -0.49
LINC01001-203ENST00000607448 DTNBO60941 627 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 HOXA13P31271 388 aaPredicted RBP12□□□□□ -0.49
LINC01001-203ENST00000607448 PDE4DQ08499 809 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 FAAP100Q0VG06 881 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 CAMK4Q16566 473 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 DUSP28Q4G0W2 176 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 ANO6Q4KMQ2 910 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 IQSEC1Q6DN90 963 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 CXCL17Q6UXB2 119 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 LRCH3Q96II8 777 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 WDR11Q9BZH6 1224 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 CBX8Q9HC52 389 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 MRPL11Q9Y3B7 192 aaKnown RBP12□□□□□ -0.49
LINC01001-203ENST00000607448 PCDHA1Q9Y5I3 950 aa12□□□□□ -0.49
LINC01001-203ENST00000607448 UQCRHLA0A096LP55 91 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 NR1I2O75469 434 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 UQCRHP07919 91 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 EIF2AK2P19525 551 aaKnown RBP11.99□□□□□ -0.49
LINC01001-203ENST00000607448 CDC25BP30305 580 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 HSD17B4P51659 736 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 PLCB2Q00722 1185 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 FSCN1Q16658 493 aaKnown RBP11.99□□□□□ -0.49
LINC01001-203ENST00000607448 PCSK9Q8NBP7 692 aaKnown RBP11.99□□□□□ -0.49
LINC01001-203ENST00000607448 BADQ92934 168 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 TMEM87BQ96K49 555 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 UBE2OQ9C0C9 1292 aaKnown RBP11.99□□□□□ -0.49
LINC01001-203ENST00000607448 SPC25Q9HBM1 224 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 GRIN2DO15399 1336 aa11.99□□□□□ -0.49
LINC01001-203ENST00000607448 LOC102724159A0A0B4J2E5 919 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 DDAH1O94760 285 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 CLTBP09497 229 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 CDK7P50613 346 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 PSMC6P62333 389 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 CCT2P78371 535 aaKnown RBP11.98□□□□□ -0.49
LINC01001-203ENST00000607448 GHRHRQ02643 423 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 FAM160A1Q05DH4 1040 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 PWP2Q15269 919 aaKnown RBP11.98□□□□□ -0.49
LINC01001-203ENST00000607448 STX1AQ16623 288 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 NFXL1Q6ZNB6 911 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 ANKRD33Q7Z3H0 272 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 BRAPQ7Z569 592 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 CKAP2LQ8IYA6 745 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 TDHQ8IZJ6 230 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 SRBD1Q8N5C6 995 aaKnown RBP11.98□□□□□ -0.49
LINC01001-203ENST00000607448 PPP1R13LQ8WUF5 828 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 ZFP91Q96JP5 570 aaPredicted RBP11.98□□□□□ -0.49
LINC01001-203ENST00000607448 GLT1D1Q96MS3 346 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 RMDN3Q96TC7 470 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 MTA3Q9BTC8 594 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 PDCL3Q9H2J4 239 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 TTC12Q9H892 705 aaPredicted RBP11.98□□□□□ -0.49
LINC01001-203ENST00000607448 PXMP2Q9NR77 195 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 RTEL1Q9NZ71 1219 aa11.98□□□□□ -0.49
LINC01001-203ENST00000607448 PNMA6FA0A0J9YX94 578 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 A0A1W2PPC1 479 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 A0A1W2PQ27 194 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 A0A1W2PQ64 194 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 A0A1W2PQD8 194 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 hCG_1642624A0A1W2PR95 340 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 CCDC69A6NI79 296 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 AP5Z1O43299 807 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 KINO60870 393 aaKnown RBP11.97□□□□□ -0.49
LINC01001-203ENST00000607448 YEATS4O95619 227 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 LIFRP42702 1097 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 ZNF165P49910 485 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 SCN5AQ14524 2016 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 GLIPR1L2Q4G1C9 344 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
LINC01001-203ENST00000607448 SARM1Q6SZW1 724 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 MICU3Q86XE3 530 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 PLA2G4DQ86XP0 818 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 MCF2L2Q86YR7 1114 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 IL31RAQ8NI17 732 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 CTCFLQ8NI51 663 aaPredicted RBP11.97□□□□□ -0.49
LINC01001-203ENST00000607448 KIAA1524Q8TCG1 905 aa11.97□□□□□ -0.49
LINC01001-203ENST00000607448 NSUN6Q8TEA1 469 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms