RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 INTS3Q68E01 1043 aaKnown RBP6.9□□□□□ -1.3
FOCAD-210ENST00000603844 CCDC144CPQ8IYA2 1237 aa6.9□□□□□ -1.3
FOCAD-210ENST00000603844 LNPKQ9C0E8 428 aa6.9□□□□□ -1.3
FOCAD-210ENST00000603844 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.3
FOCAD-210ENST00000603844 EIF3AQ14152 1382 aaKnown RBP6.9□□□□□ -1.31
FOCAD-210ENST00000603844 TMEM2Q9UHN6 1383 aa6.9□□□□□ -1.31
FOCAD-210ENST00000603844 SCAF11Q99590 1463 aaKnown RBP6.9□□□□□ -1.31
FOCAD-210ENST00000603844 IQGAP1P46940 1657 aa6.9□□□□□ -1.31
FOCAD-210ENST00000603844 AKAP8O43823 692 aaKnown RBP6.89□□□□□ -1.31
FOCAD-210ENST00000603844 MC3RP41968 323 aa6.89□□□□□ -1.31
FOCAD-210ENST00000603844 GJA9P57773 515 aa6.89□□□□□ -1.31
FOCAD-210ENST00000603844 TAGLNQ01995 201 aaKnown RBP6.89□□□□□ -1.31
FOCAD-210ENST00000603844 ANKRD39Q53RE8 183 aa6.89□□□□□ -1.31
FOCAD-210ENST00000603844 B3GNT8Q7Z7M8 397 aa6.89□□□□□ -1.31
FOCAD-210ENST00000603844 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.89□□□□□ -1.31
FOCAD-210ENST00000603844 DDX1Q92499 740 aaKnown RBP6.89□□□□□ -1.31
FOCAD-210ENST00000603844 SMPD4Q9NXE4 827 aa6.89□□□□□ -1.31
FOCAD-210ENST00000603844 DBR1Q9UK59 544 aaKnown RBP6.89□□□□□ -1.31
FOCAD-210ENST00000603844 SETBP1Q9Y6X0 1596 aa6.89□□□□□ -1.31
FOCAD-210ENST00000603844 ZNF142P52746 1687 aaPredicted RBP6.89□□□□□ -1.31
FOCAD-210ENST00000603844 ZXDAP98168 799 aa6.88□□□□□ -1.31
FOCAD-210ENST00000603844 SLITRK4Q8IW52 837 aa6.88□□□□□ -1.31
FOCAD-210ENST00000603844 ALG3Q92685 438 aa6.88□□□□□ -1.31
FOCAD-210ENST00000603844 SMARCC1Q92922 1105 aaPredicted RBP6.88□□□□□ -1.31
FOCAD-210ENST00000603844 RBM15Q96T37 977 aaKnown RBP eCLIP6.88□□□□□ -1.31
FOCAD-210ENST00000603844 C14orf93Q9H972 538 aaKnown RBP6.88□□□□□ -1.31
FOCAD-210ENST00000603844 ADGRB1O14514 1584 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 SLIT1O75093 1534 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 ASXL1Q8IXJ9 1541 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 ST20-MTHFSA0A0A6YYL1 179 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 ACRP10323 421 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 TACR1P25103 407 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 PMS1P54277 932 aaKnown RBP6.87□□□□□ -1.31
FOCAD-210ENST00000603844 ZNF445P59923 1031 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 THEMISQ8N1K5 641 aaPredicted RBP6.87□□□□□ -1.31
FOCAD-210ENST00000603844 NKD1Q969G9 470 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 PTCHD1Q96NR3 888 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 FCRL3Q96P31 734 aaPredicted RBP6.87□□□□□ -1.31
FOCAD-210ENST00000603844 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 EID1Q9Y6B2 187 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 ALKQ9UM73 1620 aa6.87□□□□□ -1.31
FOCAD-210ENST00000603844 ARHGAP23Q9P227 1491 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 CCDC7Q96M83 1385 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 MATN3O15232 486 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 TBC1D8O95759 1140 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 GLI4P10075 376 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 L1CAMP32004 1257 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 NOL9Q5SY16 702 aaKnown RBP6.86□□□□□ -1.31
FOCAD-210ENST00000603844 RGS22Q8NE09 1264 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 TSPAN17Q96FV3 270 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 NT5C1AQ9BXI3 368 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 GP6Q9HCN6 339 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 GGT7Q9UJ14 662 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 FHOD1Q9Y613 1164 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 NRXN3Q9Y4C0 1643 aa6.86□□□□□ -1.31
FOCAD-210ENST00000603844 PLEKHG1Q9ULL1 1385 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 KIF7Q2M1P5 1343 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 WASHC2AQ641Q2 1341 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 FAM86C2PA6NEL3 165 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 C1QTNF3-AMACRE9PGA6 284 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 PMLP29590 882 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 SARSP49591 514 aaKnown RBP6.85□□□□□ -1.31
FOCAD-210ENST00000603844 HS2ST1Q7LGA3 356 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 USP48Q86UV5 1035 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 BRF1Q92994 677 aa6.85□□□□□ -1.31
FOCAD-210ENST00000603844 YTHDC2Q9H6S0 1430 aaKnown RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 POLR1AO95602 1720 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 CENPJQ9HC77 1338 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 DDX10Q13206 875 aaKnown RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 TDRD10Q5VZ19 366 aaKnown RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 DCAF15Q66K64 600 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 CPZQ66K79 652 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 PPFIBP1Q86W92 1011 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 ZNF761Q86XN6 746 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 FIBCD1Q8N539 461 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 TAB3Q8N5C8 712 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 TTC9BQ8N6N2 239 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 CPA5Q8WXQ8 436 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 C1QTNF3Q9BXJ4 246 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 KRTAP3-1Q9BYR8 98 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 SPATA6Q9NWH7 488 aaPredicted RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 NTMQ9P121 344 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 STK26Q9P289 416 aa6.84□□□□□ -1.31
FOCAD-210ENST00000603844 SF3B6Q9Y3B4 125 aaKnown RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 SETD1AO15047 1707 aaKnown RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 ARHGEF28Q8N1W1 1705 aaKnown RBP6.84□□□□□ -1.31
FOCAD-210ENST00000603844 SETD1BQ9UPS6 1966 aaKnown RBP6.84□□□□□ -1.32
FOCAD-210ENST00000603844 QRICH2Q9H0J4 1663 aa6.84□□□□□ -1.32
FOCAD-210ENST00000603844 LRPPRCP42704 1394 aaKnown RBP6.83□□□□□ -1.32
FOCAD-210ENST00000603844 DISP3Q9P2K9 1392 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 DIP2AQ14689 1571 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 IFNGR1P15260 489 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 TMF1P82094 1093 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 POU4F1Q01851 419 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 AXDND1Q5T1B0 1012 aaPredicted RBP6.83□□□□□ -1.32
FOCAD-210ENST00000603844 CABP7Q86V35 215 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 SAMD11Q96NU1 681 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 NOX5Q96PH1 765 aa6.83□□□□□ -1.32
FOCAD-210ENST00000603844 ZNRF3Q9ULT6 936 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms