RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SPATA9Q9BWV2 254 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 LGR4Q9BXB1 951 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
SGMS1-207ENST00000602619 A0A1W2PQ27 194 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 A0A1W2PQ64 194 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 A0A1W2PQC6 194 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 A0A1W2PQD8 194 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 F8W031 263 aaPredicted RBP4.32□□□□□ -1.72
SGMS1-207ENST00000602619 SRGAP3O43295 1099 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 DIAPH1O60610 1272 aaKnown RBP4.32□□□□□ -1.72
SGMS1-207ENST00000602619 FZD7O75084 574 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 SEPHS1P49903 392 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 SSRP1Q08945 709 aaKnown RBP4.32□□□□□ -1.72
SGMS1-207ENST00000602619 IFRD2Q12894 506 aaPredicted RBP4.32□□□□□ -1.72
SGMS1-207ENST00000602619 DPY19L1Q2PZI1 675 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 C2orf27AQ580R0 203 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 HLA-DQA1Q5Y7H0 255 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 B3GNT8Q7Z7M8 397 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 OSBP2Q969R2 916 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 NOX5Q96PH1 765 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 ZNF747Q9BV97 191 aa4.32□□□□□ -1.72
SGMS1-207ENST00000602619 PPP1R1BQ9UD71 204 aaPredicted RBP4.32□□□□□ -1.72
SGMS1-207ENST00000602619 TRAV20A0A0B4J274 112 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 ARNTLO00327 626 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 DLX3O60479 287 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 TBC1D8O95759 1140 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 PABPC1P11940 636 aaKnown RBP4.31□□□□□ -1.72
SGMS1-207ENST00000602619 TGM1P22735 817 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 KCNAB2Q13303 367 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 SF1Q15637 639 aaKnown RBP4.31□□□□□ -1.72
SGMS1-207ENST00000602619 IQCEQ6IPM2 695 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 DENND5AQ6IQ26 1287 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 RSPO2Q6UXX9 243 aaPredicted RBP4.31□□□□□ -1.72
SGMS1-207ENST00000602619 CCDC103Q8IW40 242 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 TMEM145Q8NBT3 493 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 THAP3Q8WTV1 239 aaPredicted RBP4.31□□□□□ -1.72
SGMS1-207ENST00000602619 KCTD13Q8WZ19 329 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 KISS1RQ969F8 398 aaPredicted RBP4.31□□□□□ -1.72
SGMS1-207ENST00000602619 DNAJC7Q99615 494 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 PIF1Q9H611 641 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 ZSWIM4Q9H7M6 989 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 LRP2BPQ9P2M1 347 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 TSC22D4Q9Y3Q8 395 aa4.31□□□□□ -1.72
SGMS1-207ENST00000602619 NPHP3-ACAD11A0A0J9YXS1 232 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 AMHP03971 560 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 SNRPB2P08579 225 aaKnown RBP4.3□□□□□ -1.72
SGMS1-207ENST00000602619 PLS3P13797 630 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 PAMP19021 973 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 L1CAMP32004 1257 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 BMS1Q14692 1282 aaKnown RBP4.3□□□□□ -1.72
SGMS1-207ENST00000602619 MBLAC2Q68D91 279 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 BICRALQ6AI39 1079 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 LIMS2Q7Z4I7 341 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 LILRB2Q8N423 598 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 NAT16Q8N8M0 369 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 ADAMTS17Q8TE56 1095 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 IER2Q9BTL4 223 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 NTMQ9P121 344 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 INVSQ9Y283 1065 aa4.3□□□□□ -1.72
SGMS1-207ENST00000602619 KDM2BQ8NHM5 1336 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 CCDC163A0A0D9SF12 145 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 CCDC85CA6NKD9 419 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 KCNQ2O43526 872 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 IGSF3O75054 1194 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 C6orf222P0C671 652 aaPredicted RBP4.29□□□□□ -1.72
SGMS1-207ENST00000602619 FAM153BP0C7A2 387 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 LTBRP36941 435 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 NTRK3Q16288 839 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 TRIM61Q5EBN2 209 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 YOD1Q5VVQ6 348 aaPredicted RBP4.29□□□□□ -1.72
SGMS1-207ENST00000602619 FOXB2Q5VYV0 432 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 STYK1Q6J9G0 422 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 USP51Q70EK9 711 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 NOP9Q86U38 636 aaKnown RBP4.29□□□□□ -1.72
SGMS1-207ENST00000602619 SCUBE1Q8IWY4 988 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 PPP1R14AQ96A00 147 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 MRFAP1L1Q96HT8 127 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 EXOC2Q96KP1 924 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 ZFYVE21Q9BQ24 234 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 MTA3Q9BTC8 594 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 VPS11Q9H270 941 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 BCAS3Q9H6U6 928 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 GPRC5CQ9NQ84 441 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 PDLIM7Q9NR12 457 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 TMEM260Q9NX78 707 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 CLEC1BQ9P126 229 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 TMEFF2Q9UIK5 374 aaPredicted RBP4.29□□□□□ -1.72
SGMS1-207ENST00000602619 HS3ST3A1Q9Y663 406 aa4.29□□□□□ -1.72
SGMS1-207ENST00000602619 A0A1W2PQJ5 194 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 C7orf72A4D263 438 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 MEFVO15553 781 aaPredicted RBP4.28□□□□□ -1.72
SGMS1-207ENST00000602619 PMLP29590 882 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 SUMO1P63165 101 aaKnown RBP4.28□□□□□ -1.72
SGMS1-207ENST00000602619 KLF10Q13118 480 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 SQSTM1Q13501 440 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 INF2Q27J81 1249 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 PRSS53Q2L4Q9 553 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 NSMFQ6X4W1 530 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 TTLL7Q6ZT98 887 aa4.28□□□□□ -1.72
SGMS1-207ENST00000602619 JAMLQ86YT9 394 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms