RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 BBS5Q8N3I7 341 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 DESI2Q9BSY9 194 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 YIPF3Q9GZM5 350 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 BABAM1Q9NWV8 329 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 HEXIM1O94992 359 aaKnown RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 PPARGP37231 505 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 ZBTB18Q99592 522 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 A1CFQ9NQ94 594 aaKnown RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 DPH5Q9H2P9 285 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 MAGI1Q96QZ7 1491 aaPredicted RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 GRID2IPA4D2P6 1211 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 GMNCA6NCL1 334 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 CAPN9O14815 690 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 PSMD2Q13200 908 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 GID8Q9NWU2 228 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 CHPF2Q9P2E5 772 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 ZNF212Q9UDV6 495 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 ADGRL2O95490 1459 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 E9PCH4 1651 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 PDHA1P08559 390 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 DDIT3P35638 169 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 APOBEC2Q9Y235 224 aaKnown RBP13.17□□□□□ -0.3
SHANK2-218ENST00000601538 LAD1O00515 517 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 SERPINB4P48594 390 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 OCRLQ01968 901 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 CNGA3Q16281 694 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 ASPSCR1Q9BZE9 553 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 TNNC2P02585 160 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 DAB2IPQ5VWQ8 1189 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 VSTM4Q8IW00 320 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 HIC2Q96JB3 615 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 PITPNM3Q9BZ71 974 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 SMYD2Q9NRG4 433 aa13.17□□□□□ -0.3
SHANK2-218ENST00000601538 MYO1FO00160 1098 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 GSNP06396 782 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 TMED2Q15363 201 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SGO2Q562F6 1265 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 ACAD11Q709F0 780 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 LINS1Q8NG48 757 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 L3MBTL1Q9Y468 752 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 NCF2P19878 526 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 GPTP24298 496 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 TFAP4Q01664 338 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 CCDC28BQ9BUN5 200 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 BRIP1Q9BX63 1249 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 COG4Q9H9E3 785 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 KDM5BQ9UGL1 1544 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 CCDC188H7C350 402 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SYCP2LQ5T4T6 812 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SKA2Q8WVK7 121 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 TUBGCP3Q96CW5 907 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 ZBTB3Q9H5J0 574 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SLC24A3Q9HC58 644 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SBNO1A3KN83 1393 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 TAC1P20366 129 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 EHHADHQ08426 723 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 PNOCQ13519 176 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 PCGF5Q86SE9 256 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 INTUQ9ULD6 942 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 TYW5A2RUC4 315 aaKnown RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 AHCYL1O43865 530 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 ADCY3O60266 1144 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 CHST3Q7LGC8 479 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 TRIM45Q9H8W5 580 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 ARHGAP22Q7Z5H3 698 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 ATP6V1E2Q96A05 226 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 PAPOLBQ9NRJ5 636 aaKnown RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 CMA1P23946 247 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 SERPINB1P30740 379 aa13.16□□□□□ -0.3
SHANK2-218ENST00000601538 DNAJC17Q9NVM6 304 aaKnown RBP13.16□□□□□ -0.3
SHANK2-218ENST00000601538 KLC2Q9H0B6 622 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 USP40Q9NVE5 1235 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 DENND2AQ9ULE3 1009 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 NR1I2O75469 434 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 KRT37O76014 449 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 HLA-DPA1P20036 260 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 CENPUQ71F23 418 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 NLRC4Q9NPP4 1024 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 DMP1Q13316 513 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 TMEM259Q4ZIN3 620 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 DIS3L2Q8IYB7 885 aaKnown RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 BZW1Q7L1Q6 419 aaKnown RBP13.15□□□□□ -0.3
SHANK2-218ENST00000601538 NUDCD1Q96RS6 583 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 TRPV6Q9H1D0 765 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 ZFP69BQ9UJL9 534 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 HSPA13P48723 471 aa13.15□□□□□ -0.3
SHANK2-218ENST00000601538 OTUB1Q96FW1 271 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms