RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 REM2Q8IYK8 340 aaPredicted RBP25.45■■□□□ 1.66
IRF3-228ENST00000601291 ABRAQ8N0Z2 381 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 PDILTQ8N807 584 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 CCDC34Q96HJ3 373 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 CAPNS2Q96L46 248 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 SDF4Q9BRK5 362 aa25.45■■□□□ 1.66
IRF3-228ENST00000601291 PP2D1A8MPX8 630 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 TLR2O60603 784 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 ALDH1A1P00352 501 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 CABP7Q86V35 215 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 SLC5A5Q92911 643 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 GJA10Q969M2 543 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 KCNH7Q9NS40 1196 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 USP25Q9UHP3 1055 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 LCTP09848 1927 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 DNAJC25-GNG10A0A024R161 153 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 POTEMA6NI47 508 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 ARP10275 920 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 CDC25AP30304 524 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 STXBP2Q15833 593 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 LRCH2Q5VUJ6 765 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 KRT79Q5XKE5 535 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 KRBA2Q6ZNG9 492 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 CNNM3Q8NE01 707 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 GPRASP2Q96D09 838 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 UIMC1Q96RL1 719 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 PANK2Q9BZ23 570 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 WDR11Q9BZH6 1224 aa25.44■■□□□ 1.66
IRF3-228ENST00000601291 SYCE3A1L190 88 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 SOWAHBA6NEL2 793 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 IPO5O00410 1097 aaKnown RBP25.43■■□□□ 1.66
IRF3-228ENST00000601291 PGK2P07205 417 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 GNPTABQ3T906 1256 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 IQUBQ8NA54 791 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 DHX58Q96C10 678 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 CALML4Q96GE6 196 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 INPP4AQ96PE3 977 aaPredicted RBP25.43■■□□□ 1.66
IRF3-228ENST00000601291 ZIC5Q96T25 663 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 DISC1Q9NRI5 854 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 HOOK1Q9UJC3 728 aaKnown RBP25.43■■□□□ 1.66
IRF3-228ENST00000601291 STK24Q9Y6E0 443 aa25.43■■□□□ 1.66
IRF3-228ENST00000601291 LOC102724159A0A0B4J2E5 919 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 MAFGO15525 162 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 GAS7O60861 476 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 PDE4DQ08499 809 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 PWP2Q15269 919 aaKnown RBP25.42■■□□□ 1.66
IRF3-228ENST00000601291 KANK3Q6NY19 840 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 GPR142Q7Z601 462 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 CEP57L1Q8IYX8 460 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 CDHR1Q96JP9 859 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 RIT2Q99578 217 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 TEKT3Q9BXF9 490 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 ASTN1O14525 1302 aa25.42■■□□□ 1.66
IRF3-228ENST00000601291 A0A087X0B3 334 aa25.41■■□□□ 1.66
IRF3-228ENST00000601291 KARSQ15046 597 aaKnown RBP25.41■■□□□ 1.66
IRF3-228ENST00000601291 LONRF3Q496Y0 759 aa25.41■■□□□ 1.66
IRF3-228ENST00000601291 C17orf99Q6UX52 265 aa25.41■■□□□ 1.66
IRF3-228ENST00000601291 PLEKHH3Q7Z736 793 aa25.41■■□□□ 1.66
IRF3-228ENST00000601291 ERMNQ8TAM6 284 aa25.41■■□□□ 1.66
IRF3-228ENST00000601291 SNX29Q8TEQ0 813 aa25.41■■□□□ 1.66
IRF3-228ENST00000601291 AGO4Q9HCK5 861 aaKnown RBP25.41■■□□□ 1.66
IRF3-228ENST00000601291 SLC26A4O43511 780 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 CA12O43570 354 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 EIF3JO75822 258 aaKnown RBP25.4■■□□□ 1.66
IRF3-228ENST00000601291 PSMD10O75832 226 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 EDNRBP24530 442 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 ADORA2AP29274 412 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 STAT6P42226 847 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 SPIRE1Q08AE8 756 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 CRHR2Q13324 411 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 RRAGBQ5VZM2 374 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 HAUS3Q68CZ6 603 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 NCAPH2Q6IBW4 605 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 ELOA2Q8IYF1 753 aaPredicted RBP25.4■■□□□ 1.66
IRF3-228ENST00000601291 CDK5RAP3Q96JB5 506 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 SERTAD1Q9UHV2 236 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 VAV3Q9UKW4 847 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 PLXNB2O15031 1838 aa25.4■■□□□ 1.66
IRF3-228ENST00000601291 AOC2O75106 756 aa25.39■■□□□ 1.66
IRF3-228ENST00000601291 ZNF445P59923 1031 aa25.39■■□□□ 1.66
IRF3-228ENST00000601291 ZRSR1Q15695 479 aaKnown RBP25.39■■□□□ 1.66
IRF3-228ENST00000601291 TBC1D22BQ9NU19 505 aa25.39■■□□□ 1.66
IRF3-228ENST00000601291 KDM3AQ9Y4C1 1321 aa25.39■■□□□ 1.66
IRF3-228ENST00000601291 ACTN4O43707 911 aaKnown RBP25.39■■□□□ 1.65
IRF3-228ENST00000601291 SLFN14P0C7P3 912 aa25.39■■□□□ 1.65
IRF3-228ENST00000601291 PPP2R5CQ13362 524 aa25.39■■□□□ 1.65
IRF3-228ENST00000601291 RBM43Q6ZSC3 357 aaKnown RBP25.39■■□□□ 1.65
IRF3-228ENST00000601291 OTOP1Q7RTM1 612 aa25.39■■□□□ 1.65
IRF3-228ENST00000601291 MMTAG2Q9BU76 263 aaKnown RBP25.39■■□□□ 1.65
IRF3-228ENST00000601291 ASB14A6NK59 587 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 GRB14Q14449 540 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 E2F4Q16254 413 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 CKAP2LQ8IYA6 745 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 CUEDC2Q9H467 287 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 PKD2L1Q9P0L9 805 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 TCEAL9Q9UHQ7 104 aa25.38■■□□□ 1.65
IRF3-228ENST00000601291 SLC15A5A6NIM6 579 aa25.37■■□□□ 1.65
IRF3-228ENST00000601291 CCT6AP40227 531 aaKnown RBP25.37■■□□□ 1.65
IRF3-228ENST00000601291 FGD4Q96M96 766 aa25.37■■□□□ 1.65
IRF3-228ENST00000601291 NT5C3AQ9H0P0 336 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms