RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 USH1GQ495M9 461 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PPP4R3BQ5MIZ7 849 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 CCDC62Q6P9F0 684 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TRIM67Q6ZTA4 783 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 DHX38Q92620 1227 aaKnown RBP11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 NKD2Q969F2 451 aaPredicted RBP11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 UBA5Q9GZZ9 404 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ADD3Q9UEY8 706 aaKnown RBP11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PRKAG3Q9UGI9 489 aa11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 BAZ2BQ9UIF8 2168 aaKnown RBP11.86□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 A6NJR5 290 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ZBBXA8MT70 800 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ZEB2O60315 1214 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 HDAC1Q13547 482 aaPredicted RBP11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PUS10Q3MIT2 529 aaKnown RBP11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TMCO2Q7Z6W1 182 aaPredicted RBP11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ADHFE1Q8IWW8 467 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 KAT2BQ92831 832 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 TAAR1Q96RJ0 339 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 MTG1Q9BT17 334 aaPredicted RBP11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 POLR3EQ9NVU0 708 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 SLC4A7Q9Y6M7 1214 aa11.85□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 NBEAQ8NFP9 2946 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 LOC102724159A0A0B4J2E5 919 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 OPLAHO14841 1288 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 KDM4AO75164 1064 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ATP2A2P16615 1042 aaKnown RBP11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 CPT1AP50416 773 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 ARHGAP1Q07960 439 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 HIC1Q14526 733 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PPP2R5BQ15173 497 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 PWP2Q15269 919 aaKnown RBP11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 SLC35G1Q2M3R5 365 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 FAM47CQ5HY64 1035 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 WNT8BQ93098 351 aa11.84□□□□□ -0.51
MIA-RAB4B-201ENST00000600729 LCHNA4D1U4 455 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 MMP3P08254 477 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TXNP10599 105 aaKnown RBP11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SDSP20132 328 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TAP1Q03518 808 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PDE4DQ08499 809 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CDC37Q16543 378 aaPredicted RBP11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 LY6KQ17RY6 165 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TMEM67Q5HYA8 995 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GDF6Q6KF10 455 aaPredicted RBP11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 FRMD5Q7Z6J6 570 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PLEKHM2Q8IWE5 1019 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RPUSD2Q8IZ73 545 aaKnown RBP11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SYTL5Q8TDW5 730 aaPredicted RBP11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SCFD2Q8WU76 684 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 AFG1LQ8WV93 481 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TTC14Q96N46 770 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SEZ6LQ9BYH1 1024 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 NLRC5Q86WI3 1866 aa11.83□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 MYO7AQ13402 2215 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 B4E1Z4 1266 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PPP1R11O60927 126 aaPredicted RBP11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 IGHDP01880 384 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 AVPR2P30518 371 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 DEFB103AP81534 67 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 QRICH1Q2TAL8 776 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 NFRKBQ6P4R8 1299 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 MFSD6Q6ZSS7 791 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SMC5Q8IY18 1101 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ADGRF4Q8IZF3 695 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 STAG2Q8N3U4 1231 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ENAHQ8N8S7 591 aaPredicted RBP11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PNMA1Q8ND90 353 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 DNERQ8NFT8 737 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 EXOC6Q8TAG9 804 aa11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 USP9XQ93008 2570 aaPredicted RBP11.82□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TRIM6-TRIM34B2RNG4 842 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PITPNM1O00562 1244 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 NKRFO15226 690 aaKnown RBP eCLIP11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PFKMP08237 780 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SUPT20HL2P0C7V6 817 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 MBTPS1Q14703 1052 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 TRIM71Q2Q1W2 868 aaKnown RBP11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 B4GALNT3Q6L9W6 998 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 SEPT14Q6ZU15 432 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RNF135Q8IUD6 432 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 HERC6Q8IVU3 1022 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 NEK9Q8TD19 979 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 RILPL2Q969X0 211 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 JMJD4Q9H9V9 463 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 DLL3Q9NYJ7 618 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 LMCD1Q9NZU5 365 aa11.81□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 H3BQ06 376 aaPredicted RBP11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GALR2O43603 387 aaPredicted RBP11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 NBNO60934 754 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ZNF286BP0CG31 522 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 CHMP4BP1P59074 171 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 WDR5P61964 334 aaKnown RBP11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 ZNF200P98182 395 aaPredicted RBP11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 PTGISQ16647 500 aa11.8□□□□□ -0.52
MIA-RAB4B-201ENST00000600729 GPATCH4Q5T3I0 446 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms