RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 ABCC12Q96J65 1359 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 MAGI1Q96QZ7 1491 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 CLPPQ16740 277 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 KRT71Q3SY84 523 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 GALNTL6Q49A17 601 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 STKLD1Q8NE28 680 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 UBLCP1Q8WVY7 318 aaPredicted RBP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 RSPH1Q8WYR4 309 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 LRRC45Q96CN5 670 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SELENOSQ9BQE4 189 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ARHGEF38Q9NXL2 777 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 MYH7P12883 1935 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 MED23Q9ULK4 1368 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 ANKARQ7Z5J8 1434 aa10.76□□□□□ -0.69
NFKB1-212ENST00000600343 FAM237AA0A1B0GTK4 181 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 H0YGN5 161 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 TJP3O95049 919 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 PRLRP16471 622 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 MTTPP55157 894 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 FLIIQ13045 1269 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 SMUG1Q53HV7 270 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 TTC39AQ5SRH9 613 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 CDKAL1Q5VV42 579 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 TMEM132EQ6IEE7 984 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 NEK9Q8TD19 979 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 PBKQ96KB5 322 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 PFDN4Q9NQP4 134 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 NFS1Q9Y697 457 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 HTR3EA5X5Y0 456 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 TAF5LO75529 589 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 CHN1P15882 459 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 FERMT2Q96AC1 680 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 RABL2BQ9UNT1 228 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 IQSEC3Q9UPP2 1182 aaPredicted RBP10.75□□□□□ -0.69
NFKB1-212ENST00000600343 ITM2BQ9Y287 266 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 DLG5Q8TDM6 1919 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 SEMA3EO15041 775 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 LDHAP00338 332 aaKnown RBP10.75□□□□□ -0.69
NFKB1-212ENST00000600343 HPCAP84074 193 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 ASRGL1Q7L266 308 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 MCM10Q7L590 875 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 DHX32Q7L7V1 743 aaKnown RBP10.75□□□□□ -0.69
NFKB1-212ENST00000600343 GRAMD1CQ8IYS0 662 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 RETREG2Q8NC44 543 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 RNF25Q96BH1 459 aaPredicted RBP10.75□□□□□ -0.69
NFKB1-212ENST00000600343 ZNF333Q96JL9 665 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 CENPKQ9BS16 269 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 NMRK1Q9NWW6 199 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 HSFX1Q9UBD0 423 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 CD163L1Q9NR16 1453 aa10.75□□□□□ -0.69
NFKB1-212ENST00000600343 ATP9BO43861 1147 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 RAD21O60216 631 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 GNAT2P19087 354 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 SMARCA1P28370 1054 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 NT5DC1Q5TFE4 455 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CHADLQ6NUI6 762 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 KLC3Q6P597 504 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 LRRC43Q8N309 656 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 DEPTORQ8TB45 409 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 GJB4Q9NTQ9 266 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 DDX25Q9UHL0 483 aaKnown RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 POGZQ7Z3K3 1410 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 ARHGEF10O15013 1369 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 AKR1B10O60218 316 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 ITGA7Q13683 1181 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 KRT31Q15323 416 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 TRADDQ15628 312 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CFAP157Q5JU67 520 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CHMP7Q8WUX9 453 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 LARSQ9P2J5 1176 aaKnown RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 MYH13Q9UKX3 1938 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 A0A0G2JS52 829 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 PYGMP11217 842 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 PDIA3P30101 505 aaKnown RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 TRPC1P48995 793 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 ADARP55265 1226 aaKnown RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 KIF23Q02241 960 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 RRS1Q15050 365 aaKnown RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CFAP221Q4G0U5 840 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 USPL1Q5W0Q7 1092 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CLIP3Q96DZ5 547 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 DHTKD1Q96HY7 919 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 ETNK1Q9HBU6 452 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 TAB2Q9NYJ8 693 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 SERTAD1Q9UHV2 236 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 FRMD4BQ9Y2L6 1034 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 TTC26A0AVF1 554 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CYP21A2P08686 494 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 MECOMQ03112 1051 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 UAP1Q16222 522 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 ZC2HC1CQ53FD0 456 aaPredicted RBP10.74□□□□□ -0.69
NFKB1-212ENST00000600343 SMC6Q96SB8 1091 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 KRT12Q99456 494 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CAPN6Q9Y6Q1 641 aa10.74□□□□□ -0.69
NFKB1-212ENST00000600343 CYP1A1P04798 512 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms